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OPENSEQ.org
RL15 - SECY
UniProt: P02413 - P0AGA2
Length: 587
Sequences: 1113
Seq/Len: 1.92
I_Prob: 0.56
RL15 - 50S ribosomal protein L15
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL15 		SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
134_A 91_I 1.57 0.56
129_K 77_I 1.53 0.52
33_R 65_N 1.26 0.30
59_R 398_P 1.16 0.22
40_S 165_V 1.13 0.20
12_S 28_G 1.12 0.20
13_K 348_K 1.08 0.17
133_A 201_P 1.06 0.16
7_S 281_S 1.05 0.15
31_G 165_V 1.05 0.15
126_R 384_I 1.05 0.15
100_I 323_S 1.04 0.15
90_V 344_D 1.03 0.15
6_L 218_L 1.01 0.14
133_A 114_R 1.01 0.13
33_R 237_V 1.00 0.13
33_R 239_R 0.98 0.12
39_K 264_H 0.98 0.12
63_K 403_G 0.97 0.12
134_A 255_R 0.97 0.11
91_D 386_L 0.94 0.10
119_P 386_L 0.93 0.10
93_N 307_S 0.91 0.09
137_A 342_T 0.91 0.09
128_T 339_P 0.91 0.09
33_R 344_D 0.91 0.09
58_Y 277_A 0.89 0.09
81_D 290_I 0.89 0.08
58_Y 334_A 0.89 0.08
102_G 183_I 0.88 0.08
104_Q 81_G 0.88 0.08
126_R 92_I 0.87 0.08
64_F 206_T 0.87 0.08
14_K 386_L 0.87 0.08
129_K 290_I 0.87 0.08
142_I 419_Q 0.87 0.08
119_P 272_A 0.86 0.08
98_A 168_T 0.86 0.08
77_I 310_L 0.86 0.08
77_I 127_L 0.85 0.07
79_L 405_S 0.85 0.07
136_E 190_I 0.85 0.07
68_S 373_L 0.84 0.07
134_A 17_G 0.84 0.07
84_K 158_F 0.83 0.07
82_L 414_M 0.83 0.07
6_L 115_K 0.83 0.07
87_G 22_R 0.83 0.07
24_G 321_Y 0.83 0.06
143_E 439_K 0.82 0.06
110_V 414_M 0.82 0.06
102_G 228_F 0.82 0.06
108_A 181_R 0.82 0.06
64_F 253_Q 0.81 0.06
99_N 250_K 0.81 0.06
68_S 26_V 0.81 0.06
121_T 330_F 0.80 0.06
116_V 18_E 0.80 0.06
8_P 227_V 0.80 0.06
79_L 369_V 0.80 0.06
43_G 22_R 0.80 0.06
71_A 325_I 0.80 0.06
61_L 227_V 0.79 0.06
69_R 224_A 0.79 0.06
123_R 222_L 0.79 0.06
57_L 248_Y 0.79 0.06
108_A 352_F 0.79 0.06
91_D 32_V 0.79 0.06
90_V 18_E 0.79 0.06
111_I 416_F 0.79 0.06
121_T 102_L 0.79 0.05
142_I 132_S 0.79 0.05
97_A 27_I 0.79 0.05
93_N 378_A 0.78 0.05
31_G 133_I 0.78 0.05
47_R 283_I 0.78 0.05
39_K 177_Q 0.78 0.05
27_L 23_L 0.78 0.05
57_L 371_T 0.78 0.05
71_A 373_L 0.77 0.05
40_S 73_S 0.77 0.05
136_E 345_N 0.77 0.05
42_S 378_A 0.77 0.05
123_R 409_V 0.77 0.05
134_A 252_Q 0.77 0.05
64_F 62_E 0.77 0.05
12_S 243_R 0.76 0.05
141_K 82_I 0.76 0.05
77_I 67_F 0.76 0.05
93_N 369_V 0.76 0.05
16_G 290_I 0.76 0.05
39_K 44_I 0.76 0.05
67_T 292_S 0.76 0.05
36_K 282_S 0.76 0.05
116_V 229_A 0.76 0.05
29_K 127_L 0.75 0.05
132_R 346_L 0.75 0.05
96_K 196_V 0.75 0.05
19_L 267_L 0.75 0.04
3_L 107_K 0.74 0.04
77_I 129_I 0.74 0.04
64_F 322_A 0.74 0.04
2_R 283_I 0.74 0.04
67_T 375_L 0.74 0.04
110_V 189_I 0.74 0.04
59_R 397_V 0.74 0.04
113_A 45_D 0.74 0.04
55_M 351_A 0.74 0.04
121_T 116_I 0.74 0.04
108_A 44_I 0.74 0.04
125_L 244_I 0.74 0.04
80_S 118_Q 0.74 0.04
135_I 427_S 0.73 0.04
11_G 71_A 0.73 0.04
128_T 414_M 0.73 0.04
109_K 104_E 0.73 0.04
58_Y 371_T 0.73 0.04
134_A 414_M 0.73 0.04
36_K 85_Y 0.73 0.04
101_I 263_T 0.73 0.04
91_D 363_A 0.73 0.04
141_K 227_V 0.72 0.04
79_L 91_I 0.72 0.04
103_I 228_F 0.72 0.04
113_A 360_E 0.72 0.04
82_L 368_K 0.72 0.04
81_D 381_I 0.72 0.04
113_A 183_I 0.72 0.04
29_K 268_K 0.72 0.04
77_I 19_L 0.71 0.04
58_Y 433_L 0.71 0.04
40_S 256_R 0.71 0.04
101_I 219_V 0.71 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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