| UniProt: | P02413 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10876 | ||
| Length: | 144 (144) | ||
| Sequences: | 1568 | ||
| Seq/Len: | 10.89 |
| RL15
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 132_R | 136_E | 4.019 | 1.00 | |
| 124_G | 127_V | 3.4 | 1.00 | |
| 123_R | 143_E | 3.153 | 1.00 | |
| 91_D | 94_T | 3.113 | 1.00 | |
| 17_K | 27_L | 3.009 | 1.00 | |
| 112_L | 130_G | 2.936 | 1.00 | |
| 129_K | 132_R | 2.736 | 1.00 | |
| 127_V | 142_I | 2.715 | 1.00 | |
| 121_T | 141_K | 2.514 | 1.00 | |
| 27_L | 32_G | 2.254 | 1.00 | |
| 80_S | 113_A | 2.183 | 1.00 | |
| 83_A | 117_T | 2.126 | 1.00 | |
| 92_L | 125_L | 1.92 | 1.00 | |
| 93_N | 97_A | 1.909 | 1.00 | |
| 76_E | 128_T | 1.885 | 1.00 | |
| 81_D | 84_K | 1.855 | 1.00 | |
| 116_V | 120_V | 1.73 | 1.00 | |
| 82_L | 120_V | 1.721 | 1.00 | |
| 127_V | 132_R | 1.712 | 1.00 | |
| 36_K | 40_S | 1.712 | 1.00 | |
| 129_K | 133_A | 1.711 | 1.00 | |
| 90_V | 120_V | 1.677 | 1.00 | |
| 19_L | 31_G | 1.666 | 1.00 | |
| 29_K | 35_H | 1.657 | 1.00 | |
| 110_V | 124_G | 1.637 | 1.00 | |
| 19_L | 33_R | 1.627 | 1.00 | |
| 9_A | 12_S | 1.605 | 1.00 | |
| 83_A | 118_T | 1.578 | 1.00 | |
| 89_V | 94_T | 1.571 | 1.00 | |
| 78_R | 112_L | 1.562 | 1.00 | |
| 133_A | 137_A | 1.557 | 1.00 | |
| 87_G | 119_P | 1.554 | 1.00 | |
| 91_D | 123_R | 1.515 | 1.00 | |
| 110_V | 135_I | 1.509 | 1.00 | |
| 82_L | 122_V | 1.506 | 1.00 | |
| 23_I | 29_K | 1.5 | 1.00 | |
| 133_A | 136_E | 1.483 | 1.00 | |
| 2_R | 5_T | 1.467 | 1.00 | |
| 79_L | 134_A | 1.454 | 1.00 | |
| 8_P | 12_S | 1.394 | 0.99 | |
| 115_E | 134_A | 1.386 | 0.99 | |
| 109_K | 126_R | 1.38 | 0.99 | |
| 35_H | 40_S | 1.379 | 0.99 | |
| 51_E | 60_R | 1.379 | 0.99 | |
| 132_R | 144_E | 1.376 | 0.99 | |
| 94_T | 98_A | 1.364 | 0.99 | |
| 136_E | 141_K | 1.355 | 0.99 | |
| 47_R | 58_Y | 1.336 | 0.99 | |
| 16_G | 19_L | 1.334 | 0.99 | |
| 110_V | 122_V | 1.324 | 0.99 | |
| 89_V | 121_T | 1.312 | 0.99 | |
| 78_R | 111_I | 1.283 | 0.99 | |
| 39_K | 45_G | 1.221 | 0.98 | |
| 30_T | 35_H | 1.219 | 0.98 | |
| 135_I | 140_G | 1.181 | 0.98 | |
| 81_D | 100_I | 1.179 | 0.98 | |
| 55_M | 58_Y | 1.148 | 0.97 | |
| 81_D | 113_A | 1.146 | 0.97 | |
| 110_V | 127_V | 1.137 | 0.97 | |
| 92_L | 101_I | 1.133 | 0.97 | |
| 71_A | 74_T | 1.104 | 0.96 | |
| 57_L | 61_L | 1.092 | 0.96 | |
| 33_R | 40_S | 1.084 | 0.96 | |
| 15_A | 27_L | 1.083 | 0.96 | |
| 119_P | 141_K | 1.075 | 0.95 | |
| 79_L | 112_L | 1.075 | 0.95 | |
| 30_T | 36_K | 1.069 | 0.95 | |
| 35_H | 39_K | 1.059 | 0.95 | |
| 94_T | 97_A | 1.045 | 0.94 | |
| 19_L | 32_G | 1.041 | 0.94 | |
| 50_F | 54_Q | 1.037 | 0.94 | |
| 90_V | 95_L | 1.011 | 0.93 | |
| 124_G | 135_I | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3j3wL | 1 | 1 | 100 | 0.014 | Contact Map | 0.337 |
| 4kixL | 1 | 1 | 100 | 0.035 | Contact Map | 0.547 |
| 2zjrI | 1 | 0.9861 | 100 | 0.044 | Contact Map | 0.363 |
| 3v2dP | 1 | 0.9792 | 100 | 0.058 | Contact Map | 0.629 |
| 3bboN | 1 | 1 | 100 | 0.103 | Contact Map | 0.193 |
| 1vq8L | 1 | 0.875 | 100 | 0.319 | Contact Map | 0.519 |
| 4a17K | 1 | 0.9167 | 100 | 0.347 | Contact Map | 0.384 |
| 3o58Y | 1 | 0.875 | 100 | 0.377 | Contact Map | 0.046 |
| 3j39a | 1 | 0.8681 | 100 | 0.38 | Contact Map | 0.533 |
| 3j21L | 1 | 0.8472 | 100 | 0.4 | Contact Map | 0.574 |
Sequence Conservation (Image Generated using WebLogo v3)