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OPENSEQ.org

LSPA - RIBF
UniProt: P00804 - P0AG40
Length: 477
Sequences: 377
Seq/Len: 0.82
I_Prob: 0.00

LSPA - Lipoprotein signal peptidase
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LSPA
RIBF - Riboflavin biosynthesis protein RibF
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RIBF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
155_G 210_A 1.46 0.00
152_V 249_V 1.43 0.00
24_L 176_D 1.37 0.00
87_M 225_Y 1.33 0.00
112_L 300_E 1.24 0.00
89_R 280_I 1.23 0.00
104_I 229_V 1.22 0.00
68_Q 163_R 1.20 0.00
70_W 19_V 1.19 0.00
86_M 17_G 1.18 0.00
24_L 225_Y 1.14 0.00
129_V 35_L 1.12 0.00
112_L 250_A 1.12 0.00
86_M 131_A 1.12 0.00
134_F 41_E 1.11 0.00
76_A 194_R 1.09 0.00
20_L 232_L 1.07 0.00
135_A 189_F 1.07 0.00
16_V 205_I 1.06 0.00
56_A 70_A 1.05 0.00
57_A 70_A 1.05 0.00
56_A 163_R 1.04 0.00
65_G 272_I 1.01 0.00
89_R 301_L 1.01 0.00
29_L 226_A 1.01 0.00
98_N 20_L 1.00 0.00
40_V 13_A 1.00 0.00
60_F 225_Y 0.99 0.00
106_G 246_R 0.99 0.00
51_A 207_F 0.98 0.00
109_L 147_Y 0.98 0.00
12_W 185_L 0.98 0.00
134_F 261_L 0.97 0.00
77_I 212_V 0.97 0.00
59_S 163_R 0.96 0.00
58_F 296_I 0.95 0.00
154_E 28_V 0.95 0.00
16_V 82_L 0.95 0.00
152_V 261_L 0.95 0.00
151_I 7_I 0.94 0.00
139_L 105_Q 0.94 0.00
133_H 207_F 0.94 0.00
93_T 44_R 0.94 0.00
14_W 58_Q 0.94 0.00
24_L 305_E 0.94 0.00
83_L 240_V 0.94 0.00
50_Y 156_T 0.93 0.00
146_V 284_Q 0.93 0.00
78_G 44_R 0.93 0.00
45_S 54_L 0.92 0.00
52_R 70_A 0.92 0.00
66_G 125_D 0.92 0.00
150_L 243_I 0.92 0.00
22_I 212_V 0.91 0.00
143_A 30_R 0.91 0.00
104_I 269_G 0.91 0.00
39_T 39_L 0.91 0.00
148_A 201_L 0.91 0.00
57_A 61_E 0.91 0.00
36_L 192_S 0.90 0.00
50_Y 276_L 0.90 0.00
144_I 57_P 0.89 0.00
97_N 243_I 0.89 0.00
56_A 76_R 0.89 0.00
122_V 38_G 0.89 0.00
59_S 70_A 0.89 0.00
81_V 171_Q 0.88 0.00
118_H 51_M 0.88 0.00
47_N 276_L 0.88 0.00
57_A 77_E 0.88 0.00
136_T 43_G 0.87 0.00
54_Y 136_D 0.87 0.00
42_L 199_D 0.87 0.00
20_L 175_D 0.87 0.00
86_M 35_L 0.87 0.00
104_I 167_T 0.87 0.00
144_I 133_R 0.87 0.00
14_W 4_I 0.86 0.00
98_N 205_I 0.86 0.00
113_F 191_I 0.86 0.00
51_A 200_E 0.86 0.00
67_W 76_R 0.86 0.00
105_I 295_Q 0.85 0.00
67_W 163_R 0.85 0.00
122_V 254_Q 0.85 0.00
156_F 215_R 0.85 0.00
84_A 264_A 0.85 0.00
63_D 125_D 0.85 0.00
126_D 100_A 0.85 0.00
106_G 131_A 0.84 0.00
134_F 54_L 0.84 0.00
113_F 131_A 0.84 0.00
146_V 41_E 0.84 0.00
83_L 260_L 0.84 0.00
57_A 163_R 0.84 0.00
26_S 276_L 0.83 0.00
120_F 242_N 0.83 0.00
42_L 114_K 0.83 0.00
75_I 253_R 0.83 0.00
86_M 20_L 0.83 0.00
71_F 30_R 0.83 0.00
156_F 178_L 0.83 0.00
14_W 92_C 0.83 0.00
59_S 194_R 0.83 0.00
79_I 3_L 0.83 0.00
16_V 167_T 0.82 0.00
21_I 145_M 0.82 0.00
81_V 102_L 0.82 0.00
112_L 304_R 0.82 0.00
145_C 72_L 0.82 0.00
19_V 289_L 0.81 0.00
15_L 104_A 0.81 0.00
79_I 212_V 0.81 0.00
128_Y 56_E 0.81 0.00
46_L 200_E 0.80 0.00
39_T 307_F 0.80 0.00
78_G 144_G 0.80 0.00
17_V 72_L 0.80 0.00
151_I 20_L 0.80 0.00
66_G 163_R 0.80 0.00
60_F 279_K 0.80 0.00
30_I 307_F 0.80 0.00
67_W 69_P 0.80 0.00
68_Q 69_P 0.80 0.00
21_I 229_V 0.79 0.00
39_T 168_A 0.79 0.00
22_I 179_A 0.79 0.00
134_F 189_F 0.79 0.00
128_Y 229_V 0.79 0.00
125_I 147_Y 0.79 0.00
102_A 225_Y 0.79 0.00
80_S 167_T 0.79 0.00
26_S 90_V 0.79 0.00
20_L 83_A 0.79 0.00
75_I 15_Q 0.78 0.00
148_A 279_K 0.78 0.00
13_L 36_L 0.78 0.00
74_G 84_E 0.78 0.00
155_G 104_A 0.78 0.00
99_I 290_D 0.78 0.00
83_L 286_F 0.78 0.00
21_I 105_Q 0.78 0.00
120_F 108_I 0.78 0.00
108_A 170_R 0.78 0.00
42_L 104_A 0.78 0.00
14_W 72_L 0.78 0.00
48_L 263_V 0.78 0.00
44_P 260_L 0.77 0.00
15_L 1_M 0.77 0.00
30_I 156_T 0.77 0.00
126_D 207_F 0.77 0.00
17_V 97_R 0.77 0.00
15_L 182_E 0.77 0.00
109_L 180_L 0.77 0.00
128_Y 81_Y 0.77 0.00
60_F 163_R 0.77 0.00
109_L 34_A 0.76 0.00
57_A 128_R 0.76 0.00
85_V 289_L 0.76 0.00
36_L 242_N 0.76 0.00
155_G 267_L 0.76 0.00
84_A 263_V 0.76 0.00
118_H 111_L 0.76 0.00
87_M 304_R 0.76 0.00
17_V 48_L 0.76 0.00
74_G 272_I 0.76 0.00
153_L 201_L 0.76 0.00
124_M 135_G 0.76 0.00
145_C 279_K 0.76 0.00
131_D 87_V 0.76 0.00
89_R 73_T 0.76 0.00
65_G 84_E 0.75 0.00
11_R 30_R 0.75 0.00
51_A 136_D 0.75 0.00
21_I 132_G 0.75 0.00
106_G 87_V 0.75 0.00
120_F 70_A 0.75 0.00
128_Y 36_L 0.75 0.00
120_F 51_M 0.75 0.00
61_L 178_L 0.75 0.00
68_Q 125_D 0.75 0.00
90_S 164_I 0.75 0.00
69_R 241_A 0.75 0.00
143_A 169_V 0.75 0.00
22_I 155_Q 0.75 0.00
41_P 96_D 0.75 0.00
68_Q 76_R 0.75 0.00
73_A 39_L 0.75 0.00
69_R 280_I 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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