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Coupling matrix for [V:0056] and [S:0057]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0 0.4 0.1 0.7 -0.1 0.4 0.6 0 -0.2 0 -0.2 0.8 -0.3 -0.5 -0.1 -0.1 -0.4 0 -0.2
F -0.1 0.3 0 0.1 -0.1 0 -0.1 -0.1 0.1 -0.4 0.1 -0.2 -0.2 -0.3 -0.2 0.2 0.2 0.7 0.3 0.2
I -0.2 -0.3 0.4 -0.1 -0.1 0.2 -0.3 -0.4 0.5 0.9 0.2 0.3 0.1 0.4 0.2 0.5 -0.3 -0.5 -0.7 -0.3
L 0.1 -0.1 0 -0.5 -0.3 0 -0.4 -0.4 -0.2 0.8 0.3 0.3 0 -0.1 0.9 -0.4 -0.3 1.2 -0.2 0.2
V 0.6 -0.2 -0.4 -0.5 0.1 -0.2 -0.6 -0.2 0.2 1 0.4 0.3 0.3 -0.1 0.6 0 0.2 -0.1 -1.4 0.2
M 0 -0.1 -0.2 0.2 -0.1 -0.1 -0.1 -0.1 0.5 -0.3 -0.3 0.2 0.2 -0.2 0.3 -0.1 0.7 -0.3 -0.2 0.1
W -0.1 0 -0.1 0 -0.1 0 0.2 0 0.3 0.1 0.1 0.2 0 0 -0.2 -0.1 -0.2 -0.1 0.1 0
Y -0.1 0.3 0.3 0.1 -0.1 0 0 0.4 -0.1 -0.3 -0.1 -0.1 0 0.3 0 -0.1 -0.1 -0.1 -0.1 0
D -0.2 0 0 -0.1 0.2 0 0 0 -0.1 0 0.1 -0.2 0 -0.1 -0.2 -0.1 -0.2 -0.1 0.6 0
E -0.3 0 -0.1 0.2 -0.1 0.3 0 0 -0.1 -0.5 -0.3 -0.3 -0.1 0 0 0.2 0 0.5 0.9 0
K -0.1 0 -0.1 0.6 -0.1 0 0 0 -0.1 -0.3 -0.2 -0.2 0 -0.1 0.4 0.2 0.2 -0.1 -0.1 0
R 0.3 0 0.2 0.5 0 -0.1 0 0 -0.2 0.1 -0.3 -0.2 -0.1 0.3 -0.2 0.1 -0.2 0 -0.1 0
H 0.5 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.5 -0.2 -0.2 -0.1 0.3 -0.3 0.2 0 0 0.8 0
N -0.1 0 0 0.1 0.3 0 0 0.1 -0.1 -0.2 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 0.3 0
Q -0.1 0 0 -0.1 0.2 0 0 0.4 0 -0.1 -0.1 -0.1 0 0 -0.1 0.1 -0.1 0 0 0
S 0.2 -0.1 0.7 0.1 -0.1 -0.1 0.6 0.2 0 -0.5 0.2 0 -0.2 0.4 -0.6 -0.2 -0.3 0.1 0 0.1
T 0.3 -0.3 -0.5 0 0.1 0.1 0.2 -0.5 -0.3 0.7 0.4 0.6 -0.4 -0.5 0.4 0.5 0.3 -0.3 -0.5 -0.2
G -0.2 0.2 -0.1 -0.1 -0.2 -0.1 0 0 -0.1 0.6 0.1 0 -0.1 0 -0.3 0.2 0.4 0.1 -0.1 -0.1
P -0.2 -0.1 -0.1 0.2 -0.1 -0.1 0.1 0 0.2 -0.5 -0.3 -0.2 -0.1 0.3 0.2 -0.1 0.6 -0.2 0.3 -0.1
C 0.3 0 -0.2 -0.3 0.5 0.1 -0.1 -0.2 -0.1 0.2 0.6 0.4 -0.3 -0.2 0.3 0 -0.1 -0.4 0.1 -0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0056 0.4 0.4 -0.1 0.7 0.1 -0.1 -0.2 -0.1 -0.3 0.3 -0.1 0 -0.3 -0.8 -0.8 0.9 -0.2 0 0.1 -0.1
0057 0 -1 0.2 0.3 0.7 -0.6 -0.8 -0.9 0.2 0.5 0.6 0.6 -0.7 -0.2 0.5 1 1 -0.2 0 -0.9
Select residue pair below:
i_j Score Prob
0006_0057 1.717 1.00
0008_0057 1.345 0.99
Local Interactions:
i_j Score Prob
0057_0059 0.667 0.55
0056_0057 0.554 0.36
0055_0057 0.387 0.15
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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