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Coupling matrix for [V:0033] and [S:0053]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.5 0.3 0.2 -0.1 0.3 0.2 0.4 -0.1 -0.1 -0.5 -0.3 1 0.3 -0.5 -1.2 -0.3 -0.4 0.5 -0.1
F 0.1 0.2 -0.3 0.1 0.4 -0.1 0 -0.1 0.4 -0.3 0 -0.4 0.5 -0.1 0.2 -0.3 -0.1 -0.1 -0.1 -0.1
I 0.6 -0.2 0.5 1 0.7 0.5 -0.1 -0.2 -0.6 0.2 -0.5 -0.3 -0.3 -0.3 -0.1 -0.1 0.6 -0.6 -0.1 -0.4
L 0.4 -0.5 0.5 -0.3 0.3 0.3 -0.1 0.4 -0.6 -0.3 -0.3 0.3 0.6 -0.4 -0.4 0.5 0.1 0.2 -0.3 0
V 0.3 -0.1 0.1 1.4 1 -0.1 -0.2 -0.9 0.4 0.3 0.1 0.1 -0.3 -0.6 0 0 1.1 -1.4 -0.6 -0.1
M 0.1 -0.2 -0.3 0 -0.2 -0.2 0 -0.2 0.1 -0.3 0.2 1 0.4 -0.3 0.5 0.2 -0.3 -0.3 -0.1 -0.2
W -0.4 0 0 0 -0.1 0 0 0 -0.1 -0.1 -0.1 -0.1 0 0 0 0.3 -0.1 -0.1 0 0
Y -0.3 -0.2 -0.2 -0.3 0.2 -0.1 0 -0.2 -0.3 0.2 0 0.2 -0.2 0.2 -0.2 0.8 -0.2 -0.1 -0.1 -0.1
D 0.1 0.7 -0.1 -1 0.3 0.5 -0.3 -0.2 -0.3 -0.1 -0.1 0.2 0.1 0.4 0.8 -0.2 0.1 0.2 -0.2 -0.1
E 0.1 0 -0.3 -0.2 -0.1 -0.1 0.1 -0.6 0.8 0 1.1 0.5 -0.8 -0.1 0.2 0.2 0.2 -0.8 0.1 -0.2
K 0.3 0.1 -0.4 0.2 -0.1 -0.3 -0.1 0.2 -0.2 -0.2 0.2 0.1 -0.3 -0.2 0.1 0.4 0.1 -0.1 0.4 0.2
R -0.6 -0.2 0.8 0.2 -0.2 -0.2 -0.1 0.2 -0.4 -0.1 0.1 0.1 0 0 -0.4 0.1 -0.4 0.4 0.1 0.5
H -0.3 -0.4 0.6 0.1 -0.4 0.4 -0.1 -0.3 -0.5 1 -0.3 0.2 -0.3 -0.1 0.2 -0.2 1 -0.2 -0.2 -0.3
N -0.3 -0.4 0.3 0.3 -0.2 -0.3 -0.1 -0.2 0.3 -0.5 0.7 -0.4 0.1 0.4 -0.5 -0.1 -0.4 1.4 0 0.1
Q 0.5 -0.1 -0.4 -0.4 -0.2 -0.3 0.3 0.9 -0.1 0.8 -0.2 -0.6 -0.4 0.1 -0.4 0.4 -0.2 0.1 -0.2 0.3
S 0.5 0 -0.3 -0.1 -0.6 -0.3 0.1 0.3 -0.6 -0.1 0.1 -0.1 -0.1 0.4 0.4 -0.1 0 0.2 0.4 0
T 0.6 0.4 0.2 -0.1 0 -0.1 0 0.1 0.2 -0.9 0.2 -0.3 -0.4 0.6 0.2 0.2 -0.3 -0.1 -0.2 -0.1
G -0.6 -0.2 -0.6 -0.6 -0.6 0 -0.2 0.1 0.9 0.5 -0.5 0.5 0.1 0.3 0.3 -0.8 -0.6 1 0.3 0.3
P 0.2 -0.3 0.3 -0.2 1 0.1 -0.1 -0.4 0.6 0 -0.2 0.1 -0.1 -0.4 -0.1 -0.3 0.5 -0.7 0.1 0.1
C -0.3 0.2 -0.3 -0.2 -0.1 -0.1 0 -0.2 -0.2 -0.2 0.4 -0.1 -0.1 -0.2 -0.3 0.5 -0.4 1.8 -0.1 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0033 0.3 -0.4 0.7 0.5 0.5 -0.4 -1.9 -0.9 1.3 0.9 -0.4 -0.1 -0.2 -0.1 -0.1 0.1 0.6 0.3 0.4 -0.8
0053 1.2 -0.5 0.5 0.3 0.7 -0.6 -1.3 -1 -1.6 0.1 0.9 0.8 -0.3 -0.3 -0.2 1.1 0.7 0.3 0.1 -0.1
Select residue pair below:
i_j Score Prob
0038_0053 1.410 1.00
0036_0053 0.880 0.84
0033_0053 0.482 0.26
Local Interactions:
i_j Score Prob
0053_0054 0.751 0.69
0053_0055 0.580 0.40
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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