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Coupling matrix for [N:0029] and [G:0040]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.4 0 -0.1 -0.1 0.3 -0.1 0 0.4 -0.1 -0.1 -0.1 -0.1 0 0 0.3 0.5 -0.1 -0.1 -0.1 0
F -0.1 0 -0.1 0 -0.2 0 0 0 0 -0.1 0.3 -0.1 0 0 0 -0.1 -0.1 -0.4 0.3 0.5
I 1.3 0 -0.1 -0.1 0 -0.6 0.1 -0.1 0.1 0.1 0.1 0.2 0.1 0.2 -0.4 -0.3 0.7 -0.3 -0.2 0.5
L -0.4 0.3 0.2 0.8 1.2 0.7 -0.1 -0.2 0 0.1 -0.3 -0.1 0.1 0.3 -0.2 0.1 -0.3 -0.1 -0.3 -0.5
V 0.3 -0.3 0.8 -0.5 0.5 0.1 -0.1 -0.2 0.1 0.4 0.2 0 -0.2 -0.3 -0.1 -0.2 -0.1 -0.2 -0.2 1.1
M -0.1 0 -0.1 0 0.8 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.3 0 -0.1
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 0 0
Y -0.1 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0 -0.1
D -0.5 0 -0.1 0 -0.4 0 0 0 0 0 0 0 0 0 0 -0.1 0 1.1 0 -0.2
E -0.2 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0.4 -0.1 0 0.4 0 -0.2
K -0.1 0 -0.1 0 -0.4 0 0 0 0 0 0.2 0 0 0 0 -0.1 0 0.6 0 -0.2
R -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.3 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.3 0 -0.1
N 0 0 -0.1 0 -0.6 0 0 0 0 -0.1 0 -0.1 0 0 0 0.1 0.3 0.8 0.4 -0.3
Q 0.4 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.1 0 -0.1
S 0 0 0.3 0 -0.3 0 0 0 0 0 0 0 0 0 0 0.3 0 -0.2 0 -0.1
T 0.2 0 0.3 0 0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.4 0.3 -0.1
G 0.4 0 -0.1 0 -0.2 -0.1 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0.3 0 -0.1
P -0.3 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.5 0 -0.1
C -0.3 0 -0.1 0 0.1 0 0 0 0 0 0 0.4 0 0 0 0 0 0.1 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0029 0.4 0.2 2.1 2 3 -0.2 -1.1 -0.7 -0.8 -0.3 -1 -0.7 -0.4 0.3 -0.5 -0.2 -0.1 -0.4 -0.8 -0.4
0040 0.1 -0.4 0.4 -0.3 1.2 -0.4 -0.6 -0.6 -0.4 0.1 0.3 -0.1 -0.4 -0.2 -0.3 0.6 0.2 1.1 0.3 -0.5
Select residue pair below:
i_j Score Prob
0005_0029 1.300 0.99
0003_0029 0.572 0.39
0029_0040 0.474 0.25
0029_0041 0.451 0.22
0002_0029 0.421 0.18
0004_0029 0.390 0.15
Local Interactions:
i_j Score Prob
0029_0030 0.738 0.67
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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