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Coupling matrix for [N:0017] and [L:0039]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 0 -0.2 -0.3 0.1 0.1 -0.1 0.5 1.1 0.2 -0.1 0 0.2 -0.2 -0.3 -0.4 -0.1 -0.1 -0.1 -0.1
F 0.4 -0.1 -0.1 0.3 0.3 -0.1 0 -0.1 -0.1 0.1 -0.2 -0.5 -0.1 0 -0.1 -0.1 -0.2 0 0 0
I -0.1 -0.1 -0.1 -0.5 -0.1 -0.2 -0.1 0 0.1 0 1.1 0 0 -0.1 0.2 -0.1 -0.2 -0.1 0 0
L -0.1 0.2 -0.2 -0.6 -0.2 -0.2 -0.1 -0.4 0.2 0.4 0.2 0.3 -0.1 -0.1 0.4 0.5 -0.4 -0.1 0 -0.1
V -0.1 -0.2 0 0.1 0 -0.4 -0.1 -0.1 0.8 0.2 0 0.7 -0.3 -0.1 0.1 -0.1 -0.2 -0.1 -0.1 -0.1
M -0.1 0.2 -0.2 -0.5 -0.2 -0.1 -0.1 0.5 0.8 -0.2 0.1 -0.2 0.3 -0.1 0.2 -0.2 -0.3 -0.1 0 -0.1
W 0 0 -0.1 -0.3 -0.1 -0.1 0 0.3 -0.1 -0.2 -0.3 0.4 0 0 -0.1 -0.1 -0.1 0 0 0
Y -0.1 -0.1 0.9 -0.2 -0.1 -0.1 -0.1 -0.2 -0.2 -0.3 0.2 -0.4 -0.1 0.3 0.4 -0.1 -0.2 -0.1 0 0
D 0.7 0.7 0.2 -0.1 0.3 0.6 0.7 0.2 -1.1 -0.5 0.2 0 -0.8 -0.4 0.1 -0.1 0.3 0.6 -0.5 -0.4
E -0.2 0.4 0 0.2 -0.3 0 0.6 0.5 -1 0.1 0.1 0.2 0.1 0.2 0 0.4 0.1 -0.5 -0.3 0
K -0.2 -0.2 -0.1 0 0 -0.1 0.2 0 -0.2 0.5 -0.3 -0.4 0 -0.1 -0.6 0 1 0.2 0.3 -0.1
R 0 -0.5 -0.2 0.7 0.2 1.3 0 -0.3 -0.3 0.4 -0.1 -0.4 -0.2 0 -0.2 -0.1 -0.1 0.1 -0.1 -0.2
H -0.2 -0.3 0.3 0.3 -0.3 -0.3 -0.2 0.4 -0.2 0 0.6 0 0.1 -0.1 -0.5 0.1 0.6 -0.1 0 -0.1
N -0.1 0.2 -0.2 0.6 0.8 -0.1 -0.5 -0.4 0.1 -0.3 -0.6 -0.8 -0.2 0.2 0.7 0.9 0 0.2 0 0.1
Q 0.1 -0.2 0.6 -0.4 -0.6 -0.4 0.7 0.5 -0.6 -0.4 0 0.5 0.1 0 -0.5 0.1 -0.1 -0.2 0.2 0.8
S -0.5 0.4 0.1 0.3 0.5 0.4 -0.6 -0.6 1 -0.2 -0.1 -0.3 0.2 -0.2 0.2 0.1 -0.3 0.5 -0.2 -0.1
T 0 0 0 -0.2 0.3 -0.3 -0.3 0.4 0.3 -0.2 0 0.4 0.2 0.3 0.4 -0.6 -0.2 0.1 0 0.2
G 0.3 0 -0.1 0.3 0 -0.5 -0.3 -0.2 -0.5 0.5 -0.2 0.3 0.3 0.3 0.2 -0.1 0.9 -0.7 0.4 -0.1
P -0.1 -0.1 -0.1 0.1 -0.1 0.9 -0.1 -0.2 -0.2 0 -0.5 0.1 -0.1 -0.1 0.1 -0.1 0.1 0 0 0
C -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.3 -0.1 0.8 0.5 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0017 0.2 -1.5 -0.7 -0.7 -0.3 -0.8 -1.7 -0.8 2 1.3 -0.2 0.1 0.1 1.6 0.3 1.4 1.1 1.6 -0.9 -0.8
0039 -0.7 0 0.4 0.7 0.8 0.3 -1.1 0.8 -0.6 1.3 1.1 1.1 -0.1 -0.5 0.5 -0.3 0.2 -0.7 -1.1 -0.8
Select residue pair below:
i_j Score Prob
0039_0048 2.778 1.00
0031_0039 2.375 1.00
0039_0050 0.939 0.89
0033_0039 0.549 0.35
0035_0039 0.405 0.17
0017_0039 0.404 0.17
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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