May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
SH3 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [N:0017] and [E:0018]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.1 0.2 0.2 -0.1 -0.1 0 -0.3 0.4 0.1 0.1 0 0 -0.1 -0.4 0.6 -0.3 -0.2 -0.1 0
F 0 0 0 0 0 0 0 0 -0.4 0.2 0 0 0 0 -0.1 -0.1 -0.1 0 0 -0.1
I -0.1 -0.1 -0.1 -0.1 0 -0.1 0 0.3 -0.6 -0.3 -0.1 0 -0.1 -0.1 -0.3 0.1 0.5 -0.1 0 1
L -0.1 -0.1 -0.1 -0.1 0 0.1 0 0.6 -0.6 0.1 0.2 0 -0.1 0 -0.2 -0.2 -0.2 0.2 0.3 -0.2
V -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.2 0.3 0.1 0.2 -0.1 -0.2 -0.1 -0.4 -0.3 1.1 -0.2 -0.1 -0.2
M -0.1 -0.1 0.3 -0.1 0 -0.1 0 0.3 -0.2 0.3 -0.1 0 -0.1 -0.1 -0.2 -0.2 0.2 -0.1 0 -0.2
W 0 0 0 0 0 0 0 0 -0.1 -0.2 0 0 0 0 -0.1 -0.1 -0.1 0 0 -0.1
Y 0 0 0 0.3 0 0 0 -0.1 -0.7 -0.3 0.3 0 -0.1 0 -0.1 -0.1 -0.1 0.9 0 -0.1
D 0.2 -0.7 -0.1 -0.1 -0.1 -0.4 -0.1 -0.7 0.9 1.9 -0.2 0.1 1.1 0.3 0.5 -0.7 -0.1 -0.1 -0.3 -0.1
E -0.1 -0.3 0.1 0.3 -0.1 -0.2 -0.1 -0.3 1.1 0.5 -0.1 -0.1 -0.1 -0.2 0.4 -0.3 0.3 -0.4 -0.1 0.1
K -0.1 1.1 -0.1 -0.1 0 -0.1 0.4 -0.1 -0.2 0.1 0.6 0 -0.2 -0.1 -0.3 -0.3 -0.2 -0.1 0 -0.2
R -0.2 0.6 0.2 0.1 -0.1 0 0 0.1 0.5 -0.1 0.1 -0.1 -0.3 0 -0.1 -0.2 -0.1 -0.3 0.3 -0.2
H -0.1 0.4 -0.1 -0.2 -0.1 -0.1 0 0.7 0.1 -0.9 -0.2 -0.1 0.1 0.3 -0.1 0.7 -0.3 0.1 -0.1 -0.2
N -0.3 0.2 0.2 0 0 1.1 -0.1 -0.6 -0.5 0.2 0.5 -0.2 0.2 -0.2 1.1 -1 -0.1 0 -0.2 0.4
Q 0.2 -0.1 0.2 -0.2 -0.1 -0.1 0 0.5 0.2 0.3 -0.2 0.3 -0.2 -0.1 -0.4 -0.4 -0.5 1.1 -0.1 -0.3
S 0.9 -0.5 -0.1 -0.5 -0.2 0 -0.1 -0.1 0 -0.5 -0.3 -0.2 0.2 0.3 1.1 1.1 -0.4 -0.3 0.5 -0.1
T -0.1 -0.4 -0.3 0.4 -0.1 -0.1 -0.1 0.3 0.1 -0.2 -0.2 0.3 0.1 0.1 0.3 0.4 -0.5 -0.2 0 0.7
G -0.1 0.1 -0.4 0.3 0.6 0 -0.1 -0.4 1.4 0.1 -0.1 0 -0.4 -0.2 -0.5 0.9 1.1 -0.7 -0.2 -0.4
P 0 0 0 0 0 0 0 -0.1 -0.7 0.1 0 0 -0.1 0 -0.1 -0.1 -0.1 0.7 0 0.3
C 0 -0.1 0 0 0 0 0 -0.1 0.5 -0.8 -0.1 0 0.3 0 0.2 -0.1 -0.1 -0.1 0 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0017 0.2 -1.5 -0.7 -0.7 -0.3 -0.8 -1.7 -0.8 2 1.3 -0.2 0.1 0.1 1.6 0.3 1.4 1.1 1.6 -0.9 -0.8
0018 -0.2 -0.3 -0.1 0.1 -0.8 -0.7 -0.9 0.1 1.6 2.2 0.6 -0.5 0 -0.5 0.5 -0.1 -0.1 0.3 -0.4 -0.2
Select residue pair below:
i_j Score Prob
0017_0039 0.404 0.17
Local Interactions:
i_j Score Prob
0015_0017 1.509 1.00
0017_0018 0.985 0.92
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
Page generated in 0.0095 seconds.