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Coupling matrix for [D:0012] and [K:0022]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 -0.1 -0.1 -0.1 0 -0.4 -0.1 0.1 0.3 0.2 -0.1 -0.1 0.1 0.1 0 0.3 0.4 -0.5 0.5 -0.7
F 0 -0.1 -0.1 -0.1 -0.3 0.3 0 -0.1 0.1 0.7 -0.3 0.3 -0.1 -0.3 -0.2 0.1 -0.4 -0.1 -0.1 -0.1
I -0.5 -0.2 -0.2 -0.4 -0.3 -0.3 0 0.4 -0.2 0.2 0.4 0.1 0.5 0.3 -0.2 0.2 0 -0.1 -0.2 -0.1
L -0.5 -0.2 -0.2 0.3 -0.5 0 0 -0.2 -0.3 -0.1 0.2 0.1 1.1 0 0.4 -0.6 0.1 0.5 -0.2 0.1
V -0.2 0.6 -0.2 0.1 -0.2 -0.4 -0.1 0.5 0.2 0.3 0 0 -0.2 0.2 0 0.2 0.2 -0.3 0 -0.6
M 0.7 -0.1 0.2 -0.3 0.3 -0.1 0 -0.1 -0.4 -0.5 -0.3 0.2 -0.3 0.1 -0.1 -0.3 -0.1 0.8 0.1 -0.1
W -0.1 0 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 0
Y -0.1 0 0 -0.1 -0.1 0 0 0 0.2 0 0.2 -0.4 -0.1 -0.2 0.6 -0.2 -0.1 -0.1 -0.1 -0.1
D 0 0 0.3 0.4 0.5 0.5 -0.1 0 -0.7 -0.5 0.6 1 0.1 0 -0.2 -0.1 -0.2 -0.1 -0.2 -0.4
E 0.3 0.1 -0.2 -0.4 0.5 -0.2 0.3 -0.3 -0.3 -0.2 0.4 0.1 0.1 0 -0.1 0.1 0.2 0.4 0.3 -0.3
K 0.1 0.1 -0.5 -0.3 -0.3 0.2 -0.1 -0.2 0.4 0.7 0 -0.1 -0.5 0.1 0 0.3 0.1 -0.2 0.4 0.5
R 0.1 0.2 0.1 -0.2 -0.7 -0.4 -0.1 -0.1 0.4 0 -0.6 0.1 -0.1 0.5 0.1 0 -0.4 -0.2 0.2 1.3
H 0 -0.2 -0.2 -0.2 -0.3 -0.2 0 -0.1 0.2 0.1 0 -0.3 -0.3 0.3 -0.4 0.8 0 0 -0.2 0.8
N 0.2 0.2 -0.3 0.2 0.2 -0.2 0.2 0.3 -0.3 -0.1 0.3 0.5 -0.2 -0.6 -0.5 0.3 0.1 0.3 0.2 -0.3
Q -0.2 0.3 0.2 -0.1 0.3 0 -0.2 0 0.9 0.4 -0.4 -0.4 -0.1 0.2 0.2 0 0.3 -0.5 -0.3 -0.2
S 0 -0.2 0.2 0.3 0.5 0.4 -0.1 0.1 -0.2 0.3 0 0 0.3 -0.3 0.2 -0.1 -0.3 -0.3 -0.3 0
T 0.3 -0.6 0.2 -0.1 0.4 0 -0.2 -0.3 -0.2 0.1 0.1 -0.1 0 0.1 0.3 0.1 0.1 0.1 0 0.1
G -0.4 -0.1 0.4 0.6 -0.1 0.4 0 0.2 -0.2 -0.1 0.4 0 -0.3 -0.5 -0.1 -0.4 0.1 -0.2 0.1 0
P 0 -0.2 0 -0.1 0.5 0 0 -0.4 0.2 -0.1 0.1 -0.1 0.4 -0.2 0.4 -0.3 0.2 0.1 -0.1 -0.2
C 0.2 0 0.1 0.2 0.1 0.3 0 -0.1 0.1 -0.5 -0.2 -0.7 -0.3 -0.1 0.2 0 -0.3 0.6 -0.1 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 0.4 -1.3 -0.6 0 0.6 -0.9 -2 -1.6 0.9 1.6 0.8 0.6 -0.4 1 0.8 0.9 1 -0.5 0.1 -0.9
0022 0.4 -0.7 -0.6 -0.1 0.4 -0.8 -1.5 -0.5 0.3 1.2 0.4 0.6 -0.3 0.8 0.8 0.9 0.7 -0.2 -0.4 -0.8
Select residue pair below:
i_j Score Prob
0012_0020 1.053 0.95
0012_0022 0.761 0.70
Local Interactions:
i_j Score Prob
0012_0013 0.512 0.30
0010_0012 0.413 0.18
0012_0014 0.410 0.17
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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