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Coupling matrix for [D:0012] and [T:0020]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 0.1 -0.4 -0.3 0.1 -0.2 -0.1 -0.2 0.1 0.4 -0.3 -0.1 0.2 0.2 -0.1 0.3 -0.1 0.1 0.5 -0.6
F -0.5 0 -0.1 -0.1 -0.1 0 0 0 -0.2 -0.1 0.4 -0.1 0.1 -0.1 -0.2 0.5 0.4 -0.4 0 -0.1
I 0.4 -0.1 0.2 -0.1 -0.2 -0.1 0 -0.1 -0.3 0.8 0.1 -0.3 -0.1 0.1 -0.4 -0.3 0.4 0.1 -0.3 0.1
L -0.3 0.9 -0.1 -0.1 -0.2 0 0 0.3 -0.1 -0.1 0.1 -0.2 -0.1 -0.2 0 0.2 -0.1 -0.2 0.2 0.2
V 0.4 -0.3 -0.3 0.1 -0.2 -0.2 -0.1 -0.2 0.2 0.2 0.1 -0.3 0.1 0.4 0.2 0.1 -0.2 0.2 0 -0.4
M -0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.3 0.3 -0.1 0.1 -0.1 -0.3 -0.1 0 0.6 0.4 -0.3 0
W -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1 0 -0.3 -0.1 -0.1 -0.1 0
Y -0.2 0 0 0 0 0 0 0 -0.1 -0.2 -0.1 -0.1 0.4 -0.2 -0.1 0.1 -0.1 -0.2 0.1 -0.1
D 0 -0.1 0.1 -0.3 0.6 -0.3 -0.1 -0.1 -0.5 -1.4 0.5 0.1 -0.5 -0.5 0.5 0.2 0.3 0.4 0.5 0.3
E 0 -0.2 -0.1 0.3 0 0 -0.1 0.1 -0.6 -0.6 0.6 0.7 -0.1 0.1 0.2 0 0.2 0.8 0.1 -0.1
K -0.7 0 -0.4 -0.1 0 0.1 -0.1 -0.3 0.8 0.9 -0.6 -0.4 0.3 0.4 -0.6 -0.2 0.2 0.4 -0.1 0.7
R -0.2 -0.1 0.1 0.4 -0.1 -0.1 0 0.2 0.8 0.5 -0.1 0.3 -0.2 0.4 0.2 0.1 -0.6 -0.5 -0.9 0.4
H 0 -0.1 -0.2 -0.1 -0.2 -0.1 0 0.4 0.1 0 -0.1 0.1 0.2 -0.1 0.4 0.2 -0.3 -0.6 0.2 0
N -0.1 -0.3 0.6 0.3 0.6 0.5 -0.1 -0.2 -0.3 -0.6 0.2 -0.1 0 -0.3 0.3 0.3 0 -1 -0.3 0.1
Q 0 0.1 -0.4 -0.1 -0.3 0.1 -0.1 -0.2 0.5 0 -0.7 0.1 0.1 0.7 0.1 0.4 0.4 -0.1 0.2 -0.2
S -0.1 -0.3 -0.2 -0.3 -0.4 -0.2 -0.1 -0.2 0.2 0.4 0.2 0.7 -0.5 0.4 0.4 0.2 -0.1 0.5 0.1 -0.4
T 0.1 -0.1 -0.5 0 0 0.1 -0.1 -0.3 0 0.1 -0.1 -0.5 0.4 0.6 -0.1 0.5 0.6 -0.3 0.2 0.1
G -0.2 -0.1 0.6 -0.1 0 0 0 0 -0.1 0 0.2 0.2 -0.1 -0.3 -0.2 -0.5 0 0.7 -0.1 -0.2
P 0.8 0.3 0.7 -0.2 -0.3 -0.1 0 -0.1 0.2 0.2 0.2 0.1 -0.1 -0.4 -0.1 -0.6 -1.1 0 1.1 -0.3
C 0.2 0 -0.1 0 0.3 0 0 0.4 -0.2 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.1 -0.3 0.3 -0.4 0.3
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 0.4 -1.3 -0.6 0 0.6 -0.9 -2 -1.6 0.9 1.6 0.8 0.6 -0.4 1 0.8 0.9 1 -0.5 0.1 -0.9
0020 1 -0.7 -0.7 -0.9 -0.1 -1.2 -1.7 -1.1 0.7 0.6 0.1 -0.1 -0.4 0.7 0.2 2.1 1.4 0.6 0.8 -0.4
Select residue pair below:
i_j Score Prob
0013_0020 3.303 1.00
0012_0020 1.053 0.95
Local Interactions:
i_j Score Prob
0020_0021 0.960 0.90
0020_0022 0.612 0.46
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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