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Coupling matrix for [Y:0011] and [A:0013]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0.4 0 0 0 0 0 0.7 0 -0.1 -0.1 -0.1 0 0 0 -0.4 -0.1 -0.3 -0.1 0
F 0.6 -0.1 0.2 -0.1 -0.3 -0.4 -0.3 -0.1 0 -0.3 -0.5 0.6 -0.5 -0.6 0.2 0.5 0.3 1.3 1.1 -0.5
I -0.6 0 0 -0.1 -0.1 0 0 0 0 0.3 0.3 -0.1 0 0 0 0.5 -0.1 -0.3 -0.2 0
L -0.3 -0.1 -0.1 0.1 0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.1 0.3 -0.1 0.9 0.9 -0.2 -0.2 -0.1
V -0.6 0 0.4 0.2 0.3 0 0 0 0.4 -0.1 -0.1 -0.1 0 0 0 -0.2 -0.1 -0.2 0 0
M 0 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 -0.1 0
W 0.1 0 -0.1 -0.2 -0.1 0 0 -0.1 -0.1 0 0.2 -0.2 0.3 -0.1 -0.1 0.3 -0.3 1 -0.4 -0.1
Y 0.7 -0.6 0 -0.2 -0.6 0 -0.4 -0.5 -0.2 0.4 0.8 0.3 -0.4 0 0.4 0.5 -0.3 0.3 1 0
D -0.1 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.2 -0.1 0.4
E -0.4 0 0 0 0.4 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.2 -0.1 0
K -0.5 0 0 0 0 0 0 0 0 0.3 0 0.1 0 0.4 0 -0.2 -0.1 0.1 -0.1 0
R -0.1 0 0 0.3 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 0.2 -0.2 0
H 0.5 0 -0.1 -0.1 -0.1 0 0 -0.1 -0.1 -0.2 -0.2 -0.2 0.3 -0.1 -0.1 -0.2 1.3 -0.6 0.2 -0.1
N 0.9 0 0 0 -0.1 0 0 0 -0.1 -0.1 0.2 -0.2 0 0 -0.1 -0.1 -0.4 -0.4 -0.4 0.4
Q 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.2 0.5 0
S -0.6 0 0.1 -0.1 0.6 0 0 0 0.3 -0.1 0.2 -0.1 -0.1 0 -0.1 0.4 0.1 -0.6 0 -0.1
T -0.1 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 -0.1 -0.2 -0.1 0
G -0.2 0 0 0.2 0 0 0 0 0 0 0 0 0.4 0 0 -0.2 -0.1 0.1 -0.1 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 0
C 1.1 0 -0.1 -0.1 -0.1 0 0 0 -0.1 -0.1 -0.5 -0.2 0 -0.1 -0.2 -0.2 -0.5 0.9 0.2 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0011 -0.1 1.6 -0.2 0.9 -0.2 -0.7 0.3 2.2 -0.5 -0.7 -0.4 -0.3 0.8 -0.2 -0.4 0.5 -0.5 -0.4 -0.8 -0.3
0013 1.1 -0.7 -0.1 0.1 0.1 -1.2 -1.1 -0.6 -0.2 -0.2 0.1 -0.2 -0.7 -0.6 -0.5 1.8 0.6 1.1 1.4 -0.4
Select residue pair below:
i_j Score Prob
0013_0020 3.303 1.00
0013_0018 0.668 0.55
Local Interactions:
i_j Score Prob
0013_0014 0.619 0.47
0012_0013 0.512 0.30
0011_0013 0.475 0.25
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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