OPENSEQ.org -1518203456- GREMLIN Submission

May 4, 2021 - We are working on upgrading the webserver, some pages may not work.

SH3	Return to Main Page

Instructions

Use the menu to the right to browse the coupling matrix.

Coupling matrix for [A:0007] and [I:0027]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0.8	0.3	0.5	0.1	0.4	-0.5	1.1	0.3	0.2	-0.4	-0.1	-0.1	-0.1	0.3	-0.1	-0.4	-0.5	-0.1	-0.4
F	0	0.4	-0.2	-0.2	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
I	0	-0.1	-0.2	-0.5	1.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
L	0	0.1	-0.1	0.2	0.8	-0.3	0	-0.1	0	0	0	0	0	0	0	-0.1	0	0	0	0
V	0	0.3	1.2	0.5	1.1	-0.2	-0.1	-1.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.3	0	-0.1	0.2	-0.1	-0.1
M	0	-0.1	0.4	0	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
W	0	0	-0.2	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Y	0	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
D	0	0	-0.3	0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
E	0	0	0.2	-0.1	-0.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
K	0	-0.1	-0.3	-0.5	0.3	-0.1	0	0.3	0	0	0	0	0	0	0	0	0	0	0	0
R	0	0	-0.3	0	0.3	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
H	0	-0.2	-0.6	0.1	-0.3	0.3	0.4	0.4	0	0	0	0	0	0	0	0	0	0	0	0
N	0	0	-0.2	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Q	0	0	0	-0.2	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0.4	0	0
S	0.2	0.3	0.3	0.2	-0.5	0.1	-0.1	0.2	-0.1	-0.1	0	0.2	-0.1	0	-0.1	0	0.2	-0.2	0	0.3
T	-0.1	-0.6	0.4	0.4	0.6	0.1	0	-0.3	0	0	0.2	0	0	0	-0.1	-0.1	0.3	-0.1	0	0
G	-0.1	0.1	-0.1	0.3	-0.7	0.6	0.3	-0.2	-0.1	0	0	0	0	0	0.3	-0.1	-0.1	-0.1	0	0
P	0	0	0.2	-0.2	-0.4	0	0	-0.1	0	0	0	0	0	0	0	0.4	0	0	0	0
C	-0.1	-0.2	0.1	0.9	-0.7	0.1	0	0.1	0	0	0	0	0	0	-0.1	0.3	0	0.3	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0007	2	-0.7	-0.2	0.4	1.3	-0.4	-1.1	-0.8	-0.9	-0.8	-0.7	-0.4	-0.2	-1.1	-0.6	2	1	0.8	-0.4	0.9
0027	-0.3	0.6	1.4	1.8	2.1	0.4	-0.3	0.4	-0.3	-0.6	-0.7	-0.4	-0.7	-0.6	-0.2	0.1	-0.3	-0.3	-0.7	-0.7

Select residue pair below:

i_j	Score	Prob
0007_0021	2.765	1.00
0007_0025	0.860	0.82
0007_0010	0.451	0.22
0007_0027	0.399	0.16

Local Interactions:

i_j

Score

Prob

See all coupling residues
Download raw data

Page generated in 0.0057 seconds.