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Coupling matrix for [W:0004] and [N:0060]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 0.3 -0.3 -0.2 0.1 -0.1 0 -0.2 0 0.3 -0.5 0.1 0.5 0 -0.5 0.2 0.2 0.4 0.1 -0.1
F -0.2 0 -0.1 0 0.2 0.1 -0.1 0.1 0 -0.1 0.2 0 -0.1 -0.2 0 0.1 0.4 -0.3 0 0
I 0 -0.5 0.1 -0.2 -0.5 -0.3 -0.1 0.1 0.4 -0.1 0.5 0.1 0.3 0.1 0.2 -0.2 0.4 0.3 0.2 -0.2
L -0.3 -0.4 -0.1 -0.1 0 -0.2 -0.1 0.2 0.2 -0.4 0.1 0.5 0.3 0.8 0.3 0 0.1 -0.1 0 -0.3
V 0.2 -0.1 0.2 0.2 -0.8 0.1 -0.1 -0.7 -0.2 -0.1 0.1 0 0.1 0.4 -0.1 0.2 -0.2 0 0.5 0.3
M 0.6 -0.3 0 -0.4 0.4 -0.2 -0.1 -0.3 0.3 -0.4 0.2 0.1 -0.3 0.3 0.5 -0.1 0.3 0.1 -0.1 -0.1
W 0.1 -0.1 -0.1 -0.2 0 0.1 0 0.1 -0.1 -0.4 -0.4 -0.4 -0.3 0.5 0 0.4 -0.1 0 0.1 -0.1
Y 0 0.4 0.4 -0.6 0.5 0.1 -0.1 0.2 0.3 -0.1 -0.8 0.2 0.3 -0.4 -0.5 0.3 0 -0.2 -0.2 -0.2
D 0.1 -0.1 -0.1 0.1 0.1 -0.1 0 -0.1 -0.4 -0.1 0 0.4 0.6 -0.2 0.1 -0.1 -0.3 -0.2 0.1 0
E -0.7 0.2 0.8 0.2 -0.4 0.1 -0.1 -0.2 0.2 0.3 0.9 0.3 -0.1 0 -0.5 -0.1 -0.5 -0.3 0.7 -0.2
K -0.1 0.4 -0.3 0.9 -0.3 0.1 -0.1 -0.1 0 0.3 -0.1 0.1 -0.4 -0.1 0 -0.2 -0.1 0.1 0.3 0.2
R 0.3 -0.2 -0.4 0.2 -0.9 -0.3 -0.1 -0.3 0.6 0.4 0.6 0.2 -0.4 -0.1 0.3 -0.7 0.1 -0.1 0.5 0.2
H 0.1 -0.1 0.1 0.2 0.9 -0.2 -0.1 0.6 -0.2 -0.1 -0.4 -0.4 0.4 -0.1 0.2 -0.2 -0.4 0 -0.5 -0.1
N -0.2 -0.1 -0.1 0.1 0 -0.1 0 -0.1 0.2 1.1 0.3 -0.2 -0.1 -0.2 -0.2 -0.2 -0.3 0 0.1 0
Q 0.3 -0.3 -0.3 0.2 -0.2 0.1 -0.1 0.2 -0.4 0.1 -0.2 -0.4 -0.2 0.1 0.2 0.1 0.5 0.1 -0.4 0.3
S 0.3 0.1 -0.2 -0.3 0.7 0.3 -0.1 -0.2 -0.3 -0.2 -0.1 0.2 -0.4 0.1 -0.5 0.4 0.5 0.2 0 0.1
T 0.1 0.1 -0.3 0 -0.6 0.1 0 0.1 0.2 0.3 -0.1 0.1 -0.3 0.2 0.6 0.1 0.1 -0.1 0.1 -0.2
G -0.1 0 -0.1 -0.1 -0.1 0 0 0 -0.2 0.2 0.2 0.2 -0.1 -0.1 0.1 -0.2 -0.1 -0.1 -0.2 0
P 0.1 0 -0.2 -0.2 -0.1 -0.1 0 -0.2 0.1 0.1 -0.1 -0.3 -0.2 -0.5 0.2 0.1 0.4 0.9 0.1 0
C -0.5 0.2 0.6 0.1 1 -0.1 0.3 -0.2 -0.7 -0.3 0.5 0.2 0.3 -0.4 -0.5 0.4 -0.1 -0.2 -0.4 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0004 -0.1 -0.2 0.6 0.9 1 0.1 -0.6 0.1 -0.8 0.1 0.7 0.5 -0.1 -0.7 0.2 -0.2 1.3 -1.3 0.1 -0.5
0060 0.4 -0.5 -0.1 0.1 0.4 -0.9 -2 -0.8 0.9 1 0.5 0.4 -0.3 0.5 0.2 0.8 0.5 0.6 1.2 -1.4
Select residue pair below:
i_j Score Prob
0004_0026 1.960 1.00
0004_0028 1.713 1.00
0004_0059 0.580 0.40
0004_0061 0.446 0.21
0004_0029 0.390 0.15
0004_0060 0.378 0.14
Local Interactions:
i_j Score Prob
0003_0004 0.856 0.82
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
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