May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
SH3 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [P:0003] and [A:0005]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 0 -0.2 0.2 -0.7 -0.1 -0.1 0.2 -0.1 -0.1 0.2 0.2 -0.2 0 -0.1 -0.1 -0.2 0.1 0.1 0.4
F 0 -0.7 0.5 0 0.9 -0.4 -0.2 -1.2 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.3 -0.1 0.7 -0.1 -0.1 0
I 0.5 -0.4 -0.3 0.1 0.3 -0.2 -0.2 -0.6 0.3 -0.1 -0.1 -0.2 0.2 0 -0.1 -0.1 0.6 0.1 0.2 -0.2
L 0.2 -0.1 1.3 -0.1 0 -0.1 -0.3 -0.3 -0.1 -0.1 -0.3 -0.2 -0.2 0 -0.1 0.6 0.1 -0.2 0.1 0
V 0.7 -0.6 -0.3 0.3 0.3 -0.1 -0.1 0.6 -0.1 -0.1 -0.2 -0.2 -0.2 0 -0.1 0 -0.2 0.7 0.2 -0.3
M 0.7 -0.4 -0.1 -0.3 0.2 0 -0.2 -0.4 0 0.7 -0.1 -0.1 -0.1 0 -0.1 1.2 -0.1 -0.5 -0.1 -0.2
W -0.2 -0.2 0 -0.1 -0.2 -0.1 0 -0.2 0 0 0 0 0 0 0 0 0 -0.1 0 -0.3
Y 0.5 -0.4 -0.1 0 -0.1 0.8 -0.1 -0.3 0 0 0.3 -0.1 -0.1 0 0 0.2 -0.2 -0.4 0 -0.6
D -0.5 0.6 -0.2 0.9 0 -0.3 0.2 0.3 0 -0.1 -0.1 -0.2 0.3 0 -0.1 -0.3 -0.2 -0.3 -0.1 0.1
E -0.1 -0.2 0 -0.7 0.5 0.4 -0.1 0.7 0 0.2 -0.3 0 0.3 -0.1 -0.1 -0.5 -0.4 -0.2 -0.1 1
K -0.3 0.1 -0.1 -0.8 0.2 0.7 0 0.1 -0.1 -0.1 0 0.2 -0.2 -0.1 0.3 -0.2 0.3 1 0.3 -0.7
R 0.1 -0.1 0 0.3 0.2 0.4 -0.2 0.2 -0.1 -0.1 -0.2 -0.2 -0.2 0 -0.1 -0.3 0.2 0.2 -0.1 0.7
H -0.4 0.6 -0.1 0.1 0.2 0.3 -0.1 -0.2 0 0 -0.1 -0.1 -0.1 0 0 -0.1 0.8 -0.1 0 -0.6
N -0.3 0.6 0.1 1.1 0 0 -0.2 0.3 -0.1 -0.1 -0.1 0.2 -0.2 0 -0.1 0.2 -0.2 -0.4 -0.1 -0.5
Q 0.1 0.7 -0.2 0.3 0.3 -0.1 -0.2 0.2 -0.1 -0.1 0.2 -0.2 -0.1 0 -0.1 0 -0.2 -0.4 -0.1 0.3
S -0.2 -0.1 -0.3 -0.2 -0.1 -0.1 -0.2 0.4 -0.1 -0.1 -0.2 0.4 -0.3 0 0.3 0.1 0.2 0.7 -0.1 0.2
T -0.1 0.5 0.1 0.1 0 0.2 -0.3 0.1 -0.1 -0.1 0.1 0.4 -0.2 0 -0.1 -0.3 -0.3 0 -0.1 0.1
G 0.5 -0.2 -0.2 -0.4 -0.2 -0.5 0.1 -0.1 -0.1 0.3 -0.1 0.2 -0.2 0 -0.1 0 -0.2 -0.2 -0.1 1.5
P -0.1 0.6 0 -0.6 -0.9 -0.6 1.6 0.5 -0.2 -0.2 0.5 0.2 0.1 -0.1 -0.1 -0.5 -0.3 0.5 0.1 0.3
C 0 0 -0.1 -0.2 0.4 -0.3 0.2 -0.3 0.3 0 0.3 -0.1 0.3 0 0 -0.1 0 -0.4 0 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0003 0.1 -0.8 0.3 0.5 0.6 -0.4 -1.3 -1 -0.6 -0.4 0.3 0.3 -0.6 -0.1 0.2 0.4 0.2 0.2 0.8 -0.4
0005 2.5 0.9 0.1 0.9 2.5 0.7 -1.1 1 -1 -0.9 -0.8 -0.6 -1.1 -1.6 -1.2 0 -0.3 -0.2 -1 1.4
Select residue pair below:
i_j Score Prob
0003_0032 2.138 1.00
0003_0058 1.177 0.98
0003_0029 0.572 0.39
0003_0028 0.566 0.38
Local Interactions:
i_j Score Prob
0003_0004 0.856 0.82
0003_0005 0.570 0.39
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A P W A ...
Page generated in 0.0054 seconds.