May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0185] and [L:0187]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.1 -0.1 0.4 0.7 -0.2 -0.1 -0.1 -0.1 -0.1 0.2 0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 -0.1 0 0 0 0 0 0 0 0.3 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 -0.1 0 0 0 0 0 0 0.4 0.3 0 0 0 0 0 0 0 0
S 0.3 0.2 -0.1 1.1 -0.3 0.5 -0.1 -0.1 -0.1 -0.1 -0.2 -0.3 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0185 0.9 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.4 -0.2 0 -0.2 0.2 1 0 -0.2 -0.2 -0.2
0187 -0.1 -0.1 -0.3 1.2 0.4 0.5 -0.3 -0.3 -0.3 -0.3 0.4 0.7 -0.3 -0.3 -0.1 -0.3 -0.3 -0.3 -0.3 -0.3
Select residue pair below:
i_j Score Prob
0177_0185 1.153 0.63
0011_0185 0.924 0.39
0007_0185 0.911 0.38
0008_0185 0.789 0.27
Local Interactions:
i_j Score Prob
0185_0187 1.298 0.76
0184_0185 1.033 0.51
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.0162 seconds.