May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

b1 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [L:0167] and [L:0168]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.5 0.1 -0.1 0.5 0.1 0 0 0 0 0 0 0 0 0.4 0 -0.2 0 0 0.2
F -0.1 0.1 0.6 -0.2 0.2 -0.1 0 0 0 0 0 0 0 0 0 0.2 -0.2 0 0 -0.1
I -0.1 -0.1 0.2 0.5 0.3 -0.2 0 0 0 0 0 0 0 0 -0.1 0.2 0 0 0 0.1
L 0.3 0.8 0 0.1 -0.3 -0.3 0 0 0 0 0 0 0 0 -0.1 -0.1 0.3 0 0 0.4
V -0.1 0 0.1 -0.3 0.2 0.6 0 0 0 0 0 0 0 0 -0.1 -0.1 0.3 0 0 0.2
M 0 0.2 -0.1 0.1 -0.1 0.5 0 0 0 0 0 0 0 0 -0.1 0 0.1 0 0 -0.1
W 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0.2 -0.1 0.7 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1
T 0.3 0.1 -0.2 0.7 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2
G -0.1 0.2 0.1 -0.3 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0.4 0 0 -0.1
P 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0.2 -0.1 0.5 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0167 0.5 0.4 0.8 1 0.8 0.4 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 0.2 0.2 0.5 -0.5 0.2
0168 0.1 0.9 0.6 1 0.3 0.5 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.2 0 0.6 -0.4 -0.4 0.4
Select residue pair below:
i_j Score Prob
0168_0175 1.263 0.73
0165_0168 1.261 0.73
0157_0168 1.120 0.60
0168_0171 0.976 0.44
0028_0168 0.905 0.37
Local Interactions:
i_j Score Prob
0168_0170 0.933 0.40
0167_0168 0.768 0.25
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...

Page generated in 0.1096 seconds.