May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [Y:0152] and [P:0164]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
F -0.1 0 0 0.4 -0.1 0 0 0 0 0 0 0 0 0 0 0.2 0.8 -0.1 -0.4 -0.1
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0.5 0
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0.5 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.3 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.3 0
Y 0.2 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0.1 -0.2 -0.1 0.8 -0.1
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.2 0.4
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
R 0.4 0 0 0.4 -0.1 0.3 0 0 -0.1 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 -0.1
H -0.1 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0.7 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.3 0.1 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
P 0.1 -0.1 -0.1 -0.2 0.7 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.7 0.3 0.7 -1 0.1
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0152 -0.5 0.8 -0.4 0.2 0.1 0.1 0 0.1 -0.2 -0.2 -0.1 0.7 0.2 -0.5 -0.6 0.1 -0.6 -0.5 1.7 -0.4
0164 0.2 -0.4 -0.4 0 0.2 -0.1 -0.4 -0.4 0.1 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 0.4 0.3 0.5 1.6 0.2
Select residue pair below:
i_j Score Prob
0076_0164 1.533 0.90
0066_0164 1.129 0.61
0103_0164 0.914 0.38
0152_0164 0.854 0.32
0164_0171 0.781 0.26
Local Interactions:
i_j Score Prob
0163_0164 0.815 0.29
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.0109 seconds.