OPENSEQ.org -1518105022- GREMLIN Submission

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Use the menu to the right to browse the coupling matrix.

Coupling matrix for [V:0123] and [Q:0149]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0	-0.1	0.4	0	0	0	0	0	-0.1	-0.1	0.2	0.3	-0.1	-0.1	-0.1	-0.1	-0.2	0	0	0
F	0.1	-0.5	-0.4	-0.2	-0.2	-0.1	-0.1	0.5	0.1	1	0.4	0.5	0.5	0.3	-0.2	-0.2	-0.1	0.1	-0.2	-0.1
I	-0.1	0.2	0.8	0	-0.1	-0.1	-0.1	-0.1	-0.1	0	0.3	0	-0.2	-0.4	-0.4	0.3	1	-0.1	-0.1	-0.1
L	0	0.2	-0.1	0	-0.1	0	0	-0.1	0.3	-0.1	-0.3	-0.3	0.1	-0.2	0.5	0.6	0.1	0	-0.1	0
V	-0.1	-0.4	-0.3	-0.1	-0.1	-0.1	-0.1	-0.2	-0.2	-0.2	-0.4	0.1	0.2	1.1	0.5	0.3	0.1	-0.1	-0.1	-0.1
M	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0.1	0	-0.1	0	0	0
W	-0.1	-0.3	-0.2	0	-0.1	0	0	-0.1	0.9	-0.1	0.2	0.8	-0.1	-0.2	0.4	-0.2	-0.4	-0.1	-0.1	0
Y	-0.1	1.2	0.2	-0.1	0.5	-0.1	-0.1	0.2	-0.3	-0.2	0	-0.5	0.1	-0.3	-0.1	-0.3	0.7	-0.1	-0.1	-0.1
D	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
E	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
K	0	-0.1	0	0	0	0	0	0	0	0	0.4	-0.1	-0.1	0	-0.1	0	-0.1	0	0	0
R	0	-0.1	0	0	0	0	0	0	0	0	0.2	-0.1	-0.1	0.2	0	0	-0.1	0	0	0
H	0	0.4	0	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	0	0	0	-0.1	0	0	0
N	0	-0.1	0	0	0	0	0	0	-0.1	0	-0.1	-0.1	0.4	0	0	0	-0.1	0	0	0
Q	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
S	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
T	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
G	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
P	0	0	0	0	0	0	0	0	-0.1	0	-0.1	-0.1	-0.1	0	-0.1	0	-0.1	0	0.5	0
C	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0123	0	1.9	0.9	0.7	0.7	-0.5	0.8	1.4	-0.6	-0.6	-0.4	-0.3	-0.3	-0.3	-0.6	-0.6	-0.6	-0.6	-0.3	-0.6
0149	-0.7	0.6	0.2	-0.8	-0.5	-0.9	-0.9	0	0.4	0.2	1	1	0.8	0.3	0.4	0.4	1.1	-0.7	-0.6	-0.9

Select residue pair below:

i_j	Score	Prob
0123_0149	0.789	0.27

Local Interactions:

i_j	Score	Prob
0149_0151	0.906	0.37

See all coupling residues
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