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Coupling matrix for [R:0117] and [A:0188]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 0 0.4 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.2
F -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.2
I -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
L 0.2 0 0 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0 -0.3 0 0 0 0.8
V -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0.5
M -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
Y -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.2
E -0.3 0 0 0 -0.1 0 0 -0.1 0 0 0 0 0 0.4 0 0.5 0 0 0 -0.1
K 0.7 0 0 0 -0.1 0 0 0.4 0 0 0 0 0 -0.1 0 0.3 0 0 0 -0.5
R 0.8 0 0 0 0.3 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 -0.2
H -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0 0 1.1
N -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
Q -0.3 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 1.4 0 0 0 0
S 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0 0 -0.3
T -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0.1
G -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.2
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
C -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0117 -0.5 -0.3 -0.8 1 -0.2 -0.3 -0.6 -0.3 -0.3 0.8 0.9 1.1 0.3 -0.8 0.8 0.5 -0.2 -0.3 -0.8 -1
0188 0.8 -0.2 -0.2 -0.2 0.2 -0.2 -0.2 0 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 0.3 -0.2 -0.2 -0.2 0.8
Select residue pair below:
i_j Score Prob
0117_0188 0.995 0.46
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
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