May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0109] and [N:0112]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
F 0.4 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 0
I -0.1 0 0.2 0.2 -0.1 0 0 -0.1 -0.2 -0.1 0 -0.1 -0.1 -0.2 -0.1 -0.1 0.4 0 0.2 0.4
L 0 0 0 0.1 0 0 0 0 -0.1 0 0 0 0 -0.1 0 -0.1 0 0 -0.1 0.7
V 0 0 -0.1 0.2 0 0 0 0 0.2 -0.1 0 0 0 0.2 0 -0.1 -0.1 0 0.3 -0.2
M 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
Y 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0.2 0 0 0 0 0 0
D 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0.3 0 0 0 0 0 0
E 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0.1 0 0 0 0 0 0
K 0 0 0 0.3 0 0 0 0.4 -0.1 0 0 0 0 -0.2 0 -0.1 0 0 0 0
R -0.1 0 0 0.2 0 0 0 -0.1 0 0.3 0 0 0 0.3 -0.1 -0.1 0 0 0 -0.1
H 0 0 0 -0.1 0.4 0 0 0 -0.2 0 0 0 0 0.2 0 -0.1 0 0 0 0
N 0.4 0 0 -0.1 0 0 0 -0.1 -0.1 -0.1 0.1 0 0 0.3 0 -0.1 0 0 0 0
Q -0.1 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 -0.1 0.4 0 0 0 0 0
S -0.1 0 -0.1 0.1 -0.1 0 0 -0.1 0 -0.1 0 -0.1 0.4 0.6 -0.1 -0.1 -0.1 0 -0.1 0.3
T 0 0 0 0.3 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
G 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 -0.2 0 0.3 0 0 0.4 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0
C -0.2 0.1 0 -0.3 -0.2 -0.1 -0.1 -0.3 1.7 0.5 -0.1 0.5 -0.2 -0.1 0.1 0.4 0 0.1 -0.3 -0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0109 -0.4 -0.2 0.3 0.2 0.3 -0.4 -0.4 -0.2 -0.1 -0.3 0 0.3 0 0 -0.2 0.7 -0.2 0 -0.4 0.5
0112 0 -0.4 -0.2 0.7 -0.3 -0.6 -0.6 -0.2 0.7 0.2 -0.5 0 -0.4 0.8 -0.1 0.2 0 -0.4 0.1 0.3
Select residue pair below:
i_j Score Prob
0109_0112 1.452 0.86
0095_0112 0.855 0.32
0103_0112 0.778 0.26
0112_0119 0.774 0.25
Local Interactions:
i_j Score Prob
0112_0114 0.949 0.42
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.0187 seconds.