May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0106] and [G:0171]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.9 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.3 0 -0.1
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
I -0.1 -0.2 0 -0.1 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0.4 -0.1 0.7 -0.1 -0.1
L -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0.7 0 0
V -0.1 -0.1 -0.1 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 -0.3 -0.1 0.7 0 0.2
M 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0.4 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
Y -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.5 0 -0.1 0 0
D 0 -0.1 0.4 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0 0 0
E -0.1 -0.1 0 0.3 0 0.4 0 0 0 0 0 0 0 0 0 -0.2 0 -0.2 0 -0.1
K -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0 0.5 0 0
R 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 -0.2 0 0
H 0.2 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0.1 0 -0.1
N -0.1 0.5 -0.1 -0.1 0.4 0 0 0 0 0 0 0 0 0 0 0.2 0 -0.4 -0.1 -0.1
Q 0.3 0.6 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
S 0 -0.3 -0.1 0.6 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0.6 -0.1 -0.6 -0.1 0.5
T 0.2 -0.1 0 0 0 0 0.3 0.8 0 0 0 0 0 0 0 -0.3 -0.1 0 0 -0.1
G 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 -0.3 0.4 0
P -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.3 0 0 0 0 0 0 0 0.6 0.8 -0.2 0.1 0.1
C 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.2 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0106 0.1 -0.6 0.9 0.2 0.7 -0.1 -0.6 -0.1 -0.2 -0.2 -0.3 -0.3 0.1 0.1 0.3 0.4 0.8 -0.3 0.3 -0.4
0171 0.3 0.6 0.1 0.2 -0.1 -0.1 0 0.1 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.4 -0.1 0.1 0 0.2
Select residue pair below:
i_j Score Prob
0106_0120 1.412 0.84
0106_0171 0.864 0.33
0008_0106 0.860 0.33
Local Interactions:
i_j Score Prob
0105_0106 0.780 0.26
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.0199 seconds.