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Coupling matrix for [A:0088] and [L:0173]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.7 -0.2 -0.1 1 0.2 0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.2 0.1 -0.1 -0.2
F 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.1 0 0.2 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
L 0.3 0.3 -0.1 -0.1 0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0
V 0.8 -0.2 -0.2 0.6 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 -0.3 -0.2 0 -0.1 -0.2
M -0.1 0 0.5 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
W 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.4
D 0.4 -0.1 0 -0.4 0.3 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0.4 0.6 -0.1 -0.1 -0.1
E 0.3 -0.1 0.6 -0.3 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0
K -0.1 0 0.6 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0.1 0 -0.1 0 0
R -0.1 0 -0.2 0.2 0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
H -0.1 0 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
N -0.2 0.3 0.3 -0.3 0.4 0 0 0 0 0 0 0 0 0 0 -0.2 0.3 -0.1 0 0
Q -0.2 -0.1 -0.3 0.6 -0.3 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.6 0 0
S 0.9 -0.1 -0.5 0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0.2 -0.1 -0.2 0.4 -0.1
T -0.3 0.1 0 -0.1 0.2 0 0.4 0.4 0 0 0 0 0 0 0 0.3 -0.1 -0.2 0 -0.1
G -0.5 0.4 -0.3 0.3 0.7 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 -0.3 -0.1 0.5 -0.1 0.3
P 0.1 0 0.2 -0.2 -0.3 0 0 0 0 0 0 0 0 0 0 -0.1 0.3 0.1 0 0
C 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0088 1 -0.8 -0.4 0 0.5 -0.4 -0.8 -0.5 0.8 0.3 -0.1 -0.5 -0.5 0.4 0 0.4 0.6 0.9 -0.1 -0.7
0173 0.7 0.2 1.1 1 1.1 -0.3 -0.3 -0.3 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 0.3 -0.1 0.7 -0.3 -0.1
Select residue pair below:
i_j Score Prob
0088_0173 1.223 0.70
0080_0088 0.894 0.36
0056_0088 0.809 0.28
Local Interactions:
i_j Score Prob
0088_0090 1.329 0.78
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
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