May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0065] and [K:0069]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0.5 -0.1 0 -0.2 0.4 0
F 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0
I 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0
L -0.1 0 0 -0.1 0 0 -0.2 0.3 0.1 0.3 -0.2 -0.2 -0.1 0.3 -0.1 0 0 0.2 -0.1 0
V -0.1 0 0 -0.1 0 0 -0.2 -0.1 -0.1 0.3 -0.1 -0.2 -0.1 -0.1 0 0.4 0 0.5 0 0
M 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0
W 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0
Y 0.4 0 0 0 0 0 -0.1 0 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 0 0
D -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0.4 0.1 0.3 -0.3 -0.3 0.1 0.8 0.3 -0.1 0.2 0 -0.3 -0.1 0
E -0.1 -0.1 0 -0.1 -0.1 0 0.1 0.3 -0.1 -0.1 0.9 0.6 -0.1 -0.2 -0.1 0.1 0 -0.3 -0.1 0
K -0.1 0 0 -0.1 0 0 -0.3 -0.1 -0.1 -0.1 1 0.6 -0.1 -0.1 0 -0.1 0 0.2 -0.1 0
R 0 0 0 0 0 0 -0.1 0 0 0 0.3 -0.1 0 -0.1 0 -0.1 0 -0.1 0 0
H -0.1 0 0 -0.1 -0.1 0 -0.3 -0.1 0.8 -0.1 -0.2 -0.3 -0.1 0.6 -0.1 0.3 0 0.1 -0.1 0
N -0.1 0.3 -0.1 0.2 0.3 -0.1 1.3 -0.2 -0.5 0 -0.2 -0.2 -0.3 -0.4 -0.1 -0.2 -0.1 0.9 -0.2 -0.1
Q 0 0 0 -0.1 0 0 -0.2 0 0.3 -0.1 -0.1 0 -0.1 -0.1 0 -0.1 0 0.4 0 0
S 0.5 -0.1 -0.1 0.3 0.2 -0.1 0.1 0.1 0.1 -0.3 -0.5 0.3 0.5 -0.4 -0.2 -0.3 -0.1 0 0.6 -0.1
T -0.1 0 0 0.2 -0.1 -0.1 0 0.1 -0.2 0.5 0.2 -0.3 -0.1 0.1 0.3 0.6 0 -0.5 -0.1 0
G 0 0 0 0 0 0 -0.1 0 0 0 0.4 -0.1 0 -0.1 0 0 0 -0.1 0 0
P 0 0 0 0 0 0 0.5 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0 0.2 0 0
C 0 0 0 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 0 0.4 0 0 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0065 -0.3 -0.8 -0.8 0.1 -0.1 -0.8 -0.8 -0.5 0.9 0.7 0.5 -0.3 0.3 0.7 -0.2 1.4 0.7 -0.5 -0.2 -0.6
0069 -0.2 -0.4 -0.6 0 -0.3 -0.5 0.6 -0.1 -0.1 0.1 1 1 -0.1 0.1 -0.3 0.3 -0.7 0.6 -0.1 -0.7
Select residue pair below:
i_j Score Prob
0065_0069 1.190 0.67
0045_0065 0.821 0.29
Local Interactions:
i_j Score Prob
0065_0067 1.202 0.68
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.0213 seconds.