May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0064] and [Q:0073]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.2 1.4 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.1 0 -0.1 -0.3 -0.3 -0.2 0 0.4 0
F -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.6 -0.1 -0.1 0.2 -0.1 0.3 0 -0.1 0
I -0.3 0.4 -0.3 0.3 -0.3 1.2 -0.1 -0.2 -0.2 -0.1 0.7 0 -0.3 0.2 -0.2 -0.1 -0.3 -0.1 -0.2 0.4
L 1.1 -0.3 -0.2 -0.4 1.1 -0.1 -0.2 0 -0.2 -0.1 0 -0.4 0.1 0.5 0.3 -0.1 -0.3 -0.1 -0.2 -0.1
V -0.2 -0.3 -0.1 0 0.1 -0.2 -0.3 0.5 -0.2 -0.1 0.2 0.8 0.7 0.1 0.3 -0.5 -0.1 -0.1 -0.1 -0.1
M 0 -0.1 -0.1 0.7 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.5 0.3 -0.1 -0.1 0 -0.2 -0.2 0 -0.1 0
W -0.1 -0.2 -0.2 -0.4 -0.2 -0.1 -0.4 -0.3 -0.2 -0.2 0.9 0.2 -0.2 -0.2 -0.3 0.5 1.7 0.1 -0.2 -0.1
Y -0.1 -0.1 0.3 -0.2 -0.1 -0.1 -0.2 0.3 -0.1 0.4 -0.2 -0.3 -0.1 -0.1 0.1 0.5 -0.2 0 0.3 0
D 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.4 0 0 -0.1 -0.2 0.1 -0.1 -0.1 0.3 -0.1 0 -0.1 0
E -0.1 -0.1 -0.2 -0.3 -0.2 -0.1 -0.3 -0.2 0.3 0.3 -0.3 0.5 0.1 -0.2 1 0.1 0.4 0 -0.1 -0.1
K 0.4 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 0.4 -0.1 0 -0.1 -0.2 -0.1 -0.1 0.1 -0.1 -0.1 0 -0.1 0
R -0.1 -0.1 0.2 0 -0.1 -0.1 -0.2 -0.1 0.3 -0.1 0.1 0.1 -0.1 -0.1 -0.3 0.8 0.2 0 -0.1 0
H 0 0 -0.1 0.4 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0 0 0
N -0.1 0.3 -0.1 -0.2 -0.1 -0.1 0.3 -0.1 0.6 0 0.2 -0.2 -0.1 -0.1 0.1 -0.2 -0.2 0 -0.1 0
Q -0.1 0.4 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 0.4 -0.1 -0.2 -0.1 -0.1 0 -0.1 0
S -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 0 -0.1 -0.2 -0.1 0.4 0 -0.2 -0.1 0 0.5 0
T -0.1 -0.1 0.7 0.9 0.3 -0.1 -0.1 -0.1 0.1 0 -0.2 -0.2 0 -0.1 -0.2 -0.2 -0.1 0 -0.1 0
G -0.1 1.1 -0.1 -0.2 -0.1 -0.1 0.3 -0.1 -0.1 0 -0.1 -0.2 -0.1 -0.1 0.2 -0.2 -0.1 0 -0.1 0
P 0 0 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 -0.1 -0.1 -0.1 0.4 -0.2 0.4 -0.1 0 0 0
C -0.1 -0.2 -0.2 0.2 -0.2 -0.1 1.4 -0.2 -0.1 -0.1 -0.3 -0.1 -0.2 -0.2 0.1 0.3 0 0 0.3 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0064 0.1 -0.4 0.8 0.7 0.9 0 0.7 0.1 -0.6 0.5 -0.3 0.2 -0.8 -0.1 -0.4 -0.3 0 -0.2 -0.6 0.5
0073 -0.2 0 0.2 0.6 0.2 -0.2 -0.2 -0.2 -0.2 -0.6 0.8 0.8 -0.1 0 0.7 0.7 0.3 -0.9 -0.1 -0.8
Select residue pair below:
i_j Score Prob
0064_0073 0.853 0.32
0064_0118 0.798 0.27
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.4853 seconds.