May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

b1 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [N:0059] and [F:0136]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 0 0 -0.2 0 0 -0.1 -0.4 0 0 0 0 0.5 0 0 0 0 0 0 0
F 0 -0.3 0 -0.1 0 0 0 0.5 0 0 0 0 -0.1 0 0 0 0 0 0 0
I 0 0.1 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0
L 0 0 0 0 0.4 0 0 -0.4 0 0 0 0 -0.1 0 0 0 0 0 0 0
V 0 -0.5 0 0.3 -0.1 0 0.3 0.5 0 0 0 0 -0.2 0 0 0 0 0 0 0
M 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
W 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0.1 0 0.7 -0.1 0 -0.1 -0.3 0 0 0 0 -0.1 0 0 0 0 0 0 0
D 0 0 0.3 0 -0.1 0 -0.1 0.7 0 0 0 -0.1 0 0 -0.1 0 0 0 0 0
E -0.1 -0.1 -0.1 0 0.2 0 0.1 0 0 0 0 0.3 0.4 0 -0.1 0 0 0 0 0
K 0 0.3 0 0.3 0 0 0 -0.3 0 0 0 0 -0.1 0 0 0 0 0 0 0
R 0 0.5 0 -0.1 0 0 -0.1 0.2 0 0 0 0 -0.1 0 0 0 0 0 0 0
H -0.1 0.6 0 -0.2 0 0 0.4 -0.1 0 0 0 0 -0.2 0 0 0 0 0 0 0
N 0 0.1 0 0.2 -0.1 0 -0.1 0.2 0 0 0 0 0.2 0 0 0 0 0 0 0
Q 0 -0.4 0 -0.2 0 0 -0.1 0.7 0 0 0 0 0.2 0 0.3 0 0 0 0 0
S 0 0.7 0 0.1 0 0 -0.1 -0.1 0 0 0 0 -0.2 0 0 0 0 0 0 0
T -0.1 0.4 0 -0.1 -0.1 0 0.2 0.3 0 0 0 0 0 0 0 0 0 0 0 0
G 0 -0.3 0 -0.1 0 0 -0.1 0.1 0 0 0 0 0.3 0 0 0 0 0 0 0
P 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0059 0.2 -0.2 -0.2 -0.3 0.1 -0.7 -0.7 0.2 0.4 1.1 -0.2 0.3 0.2 0.3 0.5 0.3 0.4 -0.2 -0.7 -0.7
0136 -0.2 1.2 -0.1 0.7 -0.1 -0.4 0.2 1.5 -0.4 -0.4 -0.4 -0.2 1 -0.4 -0.1 -0.4 -0.4 -0.4 -0.4 -0.4
Select residue pair below:
i_j Score Prob
0059_0146 1.670 0.94
0059_0136 1.229 0.70
Local Interactions:
i_j Score Prob
0057_0059 1.983 0.98
0058_0059 0.959 0.43
0059_0061 0.837 0.31
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...

Page generated in 0.0125 seconds.