May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [Y:0042] and [Q:0130]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 0.1 0 -0.3 -0.2 0.5 -0.2 0.5 -0.2 0.8 -0.1 -0.1
F 0.4 0 0 -0.1 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.5 -0.2 -0.1 -0.1 0.6 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 0 -0.1 0 0.1 0 0
L 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.2 -0.1 -0.1 0 0.4 0 0
V 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0 0 0.3 0 0
M 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.2 0 0 0 0.2 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
Y 0 -0.1 0.1 0.5 -0.1 -0.2 -0.1 0.4 0.5 -0.4 0.4 0.4 0.7 -0.6 0.9 -0.4 0 -0.5 -0.1 -0.1
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
H 0 0 0 -0.1 0 0 0 0 -0.1 -0.1 -0.1 -0.1 0.6 0.4 -0.1 -0.1 -0.1 -0.1 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0.1 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.4 0 -0.3 0 0
S -0.1 0 0 -0.1 0 0 0 -0.1 0.3 0.3 -0.1 -0.2 -0.2 0.2 -0.2 0.2 -0.1 0.6 0 0
T 0 0 0 -0.1 0 0 0 0 -0.1 0.5 -0.1 0.2 -0.1 -0.3 0.1 -0.2 0.4 0.1 0 0
G 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 -0.1 0.3 -0.1 -0.1 0.4 -0.2 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0.4 0 0 -0.2 0 0
C 0 0 0 0 0 0 0 0 -0.1 0 0 0.6 -0.1 -0.1 -0.1 -0.1 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0042 0.8 0.5 0.1 0 -0.2 0 -0.6 1.8 -0.6 -0.6 -0.6 -0.6 0.2 -0.4 -0.3 0.9 0.7 0 -0.3 -0.1
0130 -0.2 -0.6 -0.4 -0.2 -0.6 -0.3 -0.6 -0.2 0.1 0.1 -0.1 0.6 0.5 1.2 0.6 0.1 -0.1 2.2 -0.6 -0.6
Select residue pair below:
i_j Score Prob
0039_0042 1.087 0.56
0042_0118 0.940 0.41
0042_0130 0.807 0.28
0037_0042 0.789 0.27
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.0189 seconds.