May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

b1 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [L:0034] and [L:0147]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 -0.3 -0.2 0.5 -0.1 0 0 0 0 0 0 0 0 0 0.4 0 0 0 0
F -0.1 -0.1 0.5 0.1 -0.6 0 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 0.7 -0.1
I 0.4 -0.1 0.5 0.5 -0.5 -0.2 -0.1 0 0 0 0 -0.1 -0.1 0.3 0 -0.1 0 0 -0.1 0
L -0.2 0.2 0.3 1.1 0.7 1.2 -0.2 -0.1 -0.1 -0.1 -0.1 0.2 -0.2 -0.1 -0.1 -0.3 -0.1 -0.1 -0.3 -0.1
V 0 0 1.4 -0.2 0.1 -0.2 -0.1 0 0 0 0 0 0 -0.1 0 -0.1 0 0 -0.1 0
M 0 0 0.3 -0.2 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.2 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 -0.3 -0.2 0.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 -0.3 0.1 0.1 -0.1 0 0 0 0 0 0 0 0.4 0 0 0 0 0 0
G 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0.5 0 -0.1 0 0 0 0 0 0 0 -0.1 0 0.4 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0034 0.2 1.4 1.4 2.8 1.1 -0.1 -0.7 -0.4 -0.5 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 0 0.2 -0.7 -0.7 0.6
0147 -0.2 -0.2 1.3 1.2 1.2 0.5 -0.2 -0.4 -0.4 -0.4 -0.4 -0.2 -0.2 0.2 -0.4 0.1 -0.4 -0.4 0 -0.4
Select residue pair below:
i_j Score Prob
0026_0147 1.187 0.66
0027_0147 1.049 0.52
0080_0147 1.014 0.49
0147_0151 0.992 0.46
0034_0147 0.984 0.45
0147_0152 0.792 0.27
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...

Page generated in 0.011 seconds.