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Coupling matrix for [Y:0032] and [I:0033]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 -0.1 -0.1 0.3 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
F -0.3 0.6 0.6 1.3 1.1 -0.4 -0.1 -0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 -0.3 -0.1 -0.2
I 0.9 -0.4 0.5 0.2 0.1 -0.3 -0.1 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 0.5 -0.1 -0.2
L -0.3 1.8 -0.3 -0.3 -0.2 0.6 -0.1 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.1 -0.1 -0.1
V 0 -0.1 -0.3 0.6 0.1 0.1 -0.1 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 0.2 -0.1 0.2
M -0.1 0.2 -0.2 -0.1 -0.2 0.4 0 -0.1 0 0 0 0 0 0 0 0 0.4 0 0 0
W 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 -0.3 1.3 -0.3 0.1 -0.1 0 -0.2 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0
D 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0.2 -0.3 -0.2 0.4 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0.4 0 0 0
T 0 -0.1 -0.1 0.4 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
G 0 -0.2 -0.1 -0.1 0.2 0 0 0.4 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 -0.1 -0.1 0.3 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
C 0.3 -0.3 0.6 -0.2 -0.4 -0.1 0 -0.2 0 0 0 0 0 0 0 0 0.3 -0.1 0 0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0032 -0.4 1.2 1.5 1.5 1.5 0.1 -0.6 0.1 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 0.2 -0.3 -0.2 -0.4 0.4
0033 0.3 1.5 1.5 1.3 1.7 0.1 -0.7 0.8 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 0.1 0.1 -0.7 -0.2
Select residue pair below:
i_j Score Prob
0017_0033 1.078 0.55
Local Interactions:
i_j Score Prob
0032_0033 1.069 0.54
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
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