May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0028] and [D:0098]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.1 0 -0.3 -0.3 -0.1 -0.1 -0.1 0.5 0.6 -0.2 -0.2 -0.2 -0.1 0.3 0.4 -0.1 1.1 -0.2 -0.1
F 0.3 -0.1 -0.3 -0.2 0 0.3 0 0.1 -0.2 -0.4 -0.1 -0.1 0.6 0 0 0 -0.2 -0.2 0.2 0
I -0.2 -0.2 0.1 -0.1 0.2 -0.1 -0.1 0.3 0.4 -0.2 1.3 0.1 -0.3 0.5 -0.5 0 0.2 0 -0.4 -0.1
L -0.2 -0.2 0.3 0 -0.1 -0.1 -0.1 -0.2 -0.5 0.7 0 0.4 0 -0.1 -0.3 0.1 0.1 -0.3 1.2 -0.1
V -0.3 0.3 0.3 1.5 0.1 -0.2 -0.1 -0.2 1.1 0.2 -0.4 -0.2 -0.2 -0.6 0.5 -0.1 0.3 -0.2 -0.5 -0.1
M 0 0 -0.1 -0.1 -0.2 0 0 0 0 0.6 -0.1 0 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 0.2 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0.4 -0.1 0.7 -0.1 -0.2 0 0 0 -0.2 -0.2 -0.1 -0.1 -0.1 0.3 -0.1 -0.2 -0.1 -0.1 0.3 0
T -0.1 0.4 0.2 -0.1 -0.2 0 0 -0.1 -0.2 0.2 -0.1 -0.1 0.3 -0.1 0.2 0.2 -0.1 -0.1 -0.1 0
G -0.1 -0.1 -0.3 -0.2 1.5 -0.1 0 -0.1 0.4 -0.3 -0.1 0.1 -0.2 0.2 0.4 -0.3 -0.1 -0.1 -0.1 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.4 -0.1 -0.2 -0.2 -0.2 0 0 -0.1 -0.3 -0.3 -0.1 -0.1 0.3 0.3 0.4 0.1 0 0.3 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0028 0.7 0.5 1.1 1.3 1.4 0 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 -0.7 0.3 0.5 0.6 -0.7 0.5
0098 -0.4 -0.5 0.6 0.2 0.8 -0.8 -1.1 -0.7 0.8 0.8 -0.1 -0.2 0 0.2 0.7 0.7 -0.3 0.1 0.4 -1.1
Select residue pair below:
i_j Score Prob
0028_0168 0.905 0.37
0028_0098 0.894 0.36
0025_0028 0.890 0.36
0028_0172 0.874 0.34
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.0081 seconds.