OPENSEQ.org -1518105022- GREMLIN Submission

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Use the menu to the right to browse the coupling matrix.

Coupling matrix for [V:0025] and [V:0028]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.4	0	0	0.4	0.8	0.8	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	-0.2	-0.4	-0.1	-0.3
F	-0.1	-0.3	0.1	-0.5	0.4	-0.1	0	0	0	0	0	0	0	0	0	1	0.5	-0.3	0	0.2
I	-0.1	-0.4	1	0.6	1.1	-0.2	0	0	0	0	0	0	0	0	0	-0.2	0	-0.2	0	-0.3
L	0.4	1.2	-0.1	-0.5	0.2	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.1	0.4	0.2	-0.1	-0.4
V	0.3	-0.5	0.1	0.2	0	-0.2	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.3	-0.1	0.8	-0.1	1.1
M	-0.1	-0.1	-0.1	0.3	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0.2	0	0
W	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Y	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
D	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
E	-0.1	-0.1	0.2	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0
K	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
R	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
H	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
N	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Q	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
S	-0.1	-0.1	-0.1	-0.1	0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0.4
T	-0.4	0.2	0.4	1	-0.7	0.2	0	0	0	0	0	0	0	0	0	-0.2	-0.2	0.6	0	0.1
G	0.1	0.2	-0.1	0.3	0.6	-0.1	0	0	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	0	-0.2
P	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
C	0.5	-0.1	-0.2	-0.3	0	-0.1	0	0	0	0	0	0	0	0	0	0.4	0.3	-0.1	0	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0025	1.2	0.9	1.5	1.3	1.5	-0.3	-0.8	-0.8	-0.8	-0.5	-0.8	-0.8	-0.8	-0.8	-0.8	-0.3	1.2	0.6	-0.8	0.1
0028	0.7	0.5	1.1	1.3	1.4	0	-0.7	-0.7	-0.7	-0.7	-0.7	-0.7	-0.7	-0.7	-0.7	0.3	0.5	0.6	-0.7	0.5

Select residue pair below:

i_j	Score	Prob
0025_0028	0.890	0.36

Local Interactions:

i_j	Score	Prob
0024_0025	0.942	0.41

See all coupling residues
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