May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0017] and [P:0072]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 0 0 0 0 0 0.3 0 0 0 0 0 0 0.2 -0.1 -0.1 0 0
F -0.1 -0.1 -0.1 0.3 0.3 0 0 -0.1 -0.1 -0.1 -0.1 0.3 0.4 0 0 0 0.3 -0.2 -0.1 -0.1
I -0.3 -0.2 -0.1 0.1 0.1 -0.1 -0.1 -0.2 -0.4 -0.2 -0.2 -0.1 -0.1 -0.2 0.3 0.9 0.5 0.1 -0.1 0.2
L 0.5 0.5 0.2 0 -0.1 -0.1 0.2 -0.3 -0.3 -0.2 0.2 -0.1 -0.2 0.2 -0.2 -0.1 0 0.3 0.4 -0.2
V 0.3 -0.1 0 -0.1 0.5 0 -0.1 0.3 -0.2 -0.1 -0.1 0 -0.1 -0.1 -0.1 0.4 -0.2 0.1 -0.1 -0.1
M 0.2 0.6 0 -0.1 -0.1 0 0 -0.1 -0.2 -0.1 -0.1 0 -0.1 -0.1 -0.1 0.2 -0.1 0.4 -0.1 -0.1
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Y -0.2 -0.1 0 -0.1 0.3 0 0 -0.1 -0.2 -0.1 -0.1 0 -0.1 -0.1 0 0.6 0.2 -0.2 -0.1 0.4
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
S 1 -0.1 0 -0.1 -0.1 0 -0.1 0.3 -0.5 -0.2 -0.1 0 -0.1 -0.1 0.4 -0.1 0.2 -0.1 -0.1 -0.1
T -0.6 -0.2 -0.1 -0.1 -0.2 0 0.2 -0.2 1.5 1.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.8 0 0.3 -0.1 -0.1
G -0.1 -0.1 0 0.4 0 0 0 -0.1 -0.1 -0.1 0 0 0 0.5 0 -0.3 -0.1 -0.1 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
C -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0017 -0.1 0.7 0.5 1.3 0.6 0.4 -0.5 0.2 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 0.3 0.3 -0.2 -0.5 -0.1
0072 0.6 0.4 -0.4 0 0.2 -0.7 -0.3 0.2 0.3 0.1 -0.1 -0.4 -0.3 -0.2 -0.2 0.8 0.4 0.4 0.1 -0.3
Select residue pair below:
i_j Score Prob
0017_0068 1.512 0.89
0017_0072 1.141 0.62
0017_0033 1.078 0.55
0017_0102 1.032 0.50
0014_0017 0.981 0.45
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.0082 seconds.