May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
b1 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0005] and [A:0188]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0.4 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 0.4 0 0 0 -0.2
V 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0.1
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0 0 -0.1
Q -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0.1 0 0 0 0.3
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0005 -0.2 -0.2 -0.2 0.4 0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 0.2 -0.2 0.1 0.4 -0.2 0.3 -0.2 -0.1 -0.2
0188 0.8 -0.2 -0.2 -0.2 0.2 -0.2 -0.2 0 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 0.3 -0.2 -0.2 -0.2 0.8
Select residue pair below:
i_j Score Prob
0005_0188 1.009 0.48
0117_0188 0.995 0.46
0018_0188 0.946 0.41
0009_0188 0.891 0.36
0054_0188 0.865 0.33
0160_0188 0.783 0.26
Local Interactions:
i_j Score Prob
0186_0188 1.220 0.69
0187_0188 0.987 0.46
0188_0189 0.894 0.36
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
Page generated in 0.2975 seconds.