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Instructions
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Coupling matrix for [L:0005] and [A:0188]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0.4 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 0.4 0 0 0 -0.2
V 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0.1
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0 0 -0.1
Q -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0.1 0 0 0 0.3
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0005 -0.2 -0.2 -0.2 0.4 0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 0.2 -0.2 0.1 0.4 -0.2 0.3 -0.2 -0.1 -0.2
0188 0.8 -0.2 -0.2 -0.2 0.2 -0.2 -0.2 0 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 0.3 -0.2 -0.2 -0.2 0.8
Select residue pair below:
i_j Score Prob
0005_0009 1.757 0.96
0005_0011 1.045 0.52
0005_0188 1.009 0.48
0005_0189 0.981 0.45
0005_0186 0.945 0.41
0005_0010 0.910 0.38
0005_0014 0.784 0.26
Local Interactions:
i_j Score Prob
0004_0005 1.226 0.70
0005_0006 1.023 0.49
0005_0007 0.930 0.40
0003_0005 0.857 0.33
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V K K L ...
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