OPENSEQ.org -1517967808- GREMLIN Submission

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Coupling matrix for [A:0293] and [R:0296]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0	0	-0.1	0	0	0	0	0	-0.1	0.2	0.3	-0.2	0	0.5	-0.2	-0.1	0.2	0	-0.1
F	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	0	0
I	-0.2	0	0	0	0	0	0	0	0	-0.1	-0.1	0	-0.1	0.5	0	-0.1	0	-0.1	0	0
L	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	0	0
V	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0.4	0	0	0	0	0	0	0
M	-0.1	0	0	0	0	0	0	0	0	0	0.2	-0.1	0	0	0	0	0	0	0	0
W	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	0	0
Y	-0.3	0	0	0	0	0	0	0	0	0	-0.2	-0.1	0	0	0	0.8	0	-0.1	0	0
D	0.6	-0.1	0	-0.1	0	0	0	0	0	0.6	0.2	0.9	-0.3	-0.1	-0.2	-0.1	-0.2	0	0	-0.1
E	0.2	-0.3	-0.1	0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.1	0.3	0.8	0.1	-0.3	0.1	-0.2	0.2	0.3	-0.1	-0.2
K	-0.1	0.5	0	-0.1	0	0	0	0	0	0.4	-0.4	-0.3	-0.1	0	-0.1	0.3	0.4	-0.1	0	0
R	-0.1	0	0	0	0	0	0	0	0	0	0.5	-0.2	0	0	0	0	0	0	0	0
H	-0.1	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0	0	0	0.1	0	0
N	-0.1	0	0	0	0	0	0	0	0	0	0.2	-0.1	0	0	0	0	0	0	0	0
Q	0.8	-0.1	0	-0.1	0	0	0	0	0	-0.2	0.2	-0.7	0.3	-0.1	-0.1	0	-0.2	0.5	0	0.4
S	0.3	0	0	-0.1	0	0	0	0	0	-0.1	-0.1	0.1	0.3	0	0	0.3	-0.1	-0.1	0	-0.1
T	0.3	0	0	-0.1	0	0	0	0	0	-0.1	0.3	0.2	-0.1	0	0	-0.1	0	-0.1	0	-0.1
G	0.3	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0	0	0	-0.1	0	0
P	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	0	0
C	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0293	0.2	-0.5	0.1	-0.5	-0.2	-0.3	-0.5	-0.2	0.9	1.2	0.3	-0.1	-0.4	-0.2	0.9	0.2	0.1	-0.3	-0.5	-0.5
0296	1	-0.3	-0.5	-0.2	-0.5	-0.5	-0.5	-0.5	-0.5	0.3	0.6	0.7	0.3	-0.2	0.1	0.7	-0.1	0.4	-0.5	-0.3

Select residue pair below:

i_j	Score	Prob
0293_0297	1.436	0.82
0290_0293	1.063	0.49
0189_0293	0.979	0.41
0217_0293	0.812	0.26
0001_0293	0.798	0.25
0293_0296	0.681	0.17

Local Interactions:

i_j

Score

Prob

See all coupling residues
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