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Coupling matrix for [A:0119] and [M:0136]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.1 0.9 -0.2 1 0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0.7
F 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0.2 0.5 -0.6 0.3 0.5 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1
L 0 -0.1 0.4 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V 0 -0.5 0.8 -0.2 0.8 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
M 0.4 0 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 -0.2 0.5 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0.2 0.4 0.5 -0.5 0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0.3 0 0 -0.2
T -0.2 0.2 0.7 0.2 0.8 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
G 0 0 0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0.1 0.4 0 -0.5 0.3 0 0.4 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0119 0.7 -0.2 0.4 0 -0.3 0 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.1 -0.2 0.6 0.8 -0.1 -0.2 0.3
0136 0.5 0.7 1.9 1.4 1.4 0.6 -0.3 -0.3 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.6 -0.3 -0.6 -0.6 0.1
Select residue pair below:
i_j Score Prob
0116_0119 1.342 0.75
0119_0258 1.188 0.62
0119_0278 1.059 0.49
0119_0268 1.051 0.48
0119_0230 0.887 0.32
0003_0119 0.788 0.24
0119_0136 0.729 0.20
0051_0119 0.701 0.18
0009_0119 0.690 0.17
0119_0265 0.685 0.17
0119_0264 0.676 0.17
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
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