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Coupling matrix for [V:0116] and [A:0268]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.4 0 0.3 -0.1 0.8 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 0 0 -0.1
F -0.1 0 -0.1 0.6 -0.3 0 0 0 0 0 0 0 0 0 0 -0.1 -0.2 0 0 0.4
I 1.1 -0.1 -0.1 0.1 -0.8 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0.1 0.2 0.4 -0.1 0.6
L -0.2 -0.1 0.8 0.1 1.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.5 0.2 0 -0.1 -0.6
V 1.5 -0.1 -0.2 -0.1 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.8 -0.3 -0.2 -0.1 0.1
M -0.3 0 0.1 0.5 0.3 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0.1 -0.1 0 0
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0.5 0 0 0 0 0 0
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.2 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0.5 0 0 -0.1
G -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0116 0.2 0.2 1.2 0.8 0.7 0.5 -0.3 0 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.1 -0.3 -0.3 -0.3
0268 1 -0.4 0.7 1.3 1 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 0 -0.4 0 0.5 -0.1 -0.4 0.3
Select residue pair below:
i_j Score Prob
0116_0268 3.269 1.00
0116_0281 2.224 0.99
0116_0119 1.342 0.75
0088_0116 0.860 0.30
0116_0277 0.699 0.18
0047_0116 0.679 0.17
Local Interactions:
i_j Score Prob
0115_0116 1.107 0.54
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
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