OPENSEQ.org -1517967808- GREMLIN Submission

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Coupling matrix for [V:0107] and [A:0268]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	1.2	-0.1	0.2	0.1	0.6	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	-0.1	0.2	-0.2	-0.2	-0.1	-0.3
F	-0.2	0	0	0.2	-0.1	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
I	0.1	0	0	0.6	0.2	0	0	0	0	0	0	0	0	0.3	0	0.1	0.1	-0.1	0	-0.3
L	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0.4	-0.1	0	0	0
V	-0.1	-0.1	0.7	0.4	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.2	-0.1	-0.1	0	0.4	-0.1	0.2
M	-0.2	0	0	0.2	-0.1	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
W	-0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Y	-0.3	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	-0.2	0.4	0	0	0
D	-0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
E	0	0	0.4	-0.1	-0.3	0	0	0	0	0	0	0	0	0	0	0.3	-0.1	0	0	0
K	0.5	0	-0.1	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0.2	-0.1	0	0	-0.1
R	-0.2	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0.1
H	-0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
N	0	0	-0.1	-0.1	0.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1
Q	0.4	0	-0.1	0.3	-0.2	0	0	0	0	0	0	0	0	0	0	0.1	-0.2	0	0	-0.1
S	0.1	0	-0.2	-0.2	0.7	0	0	0	0	0	0	0	0	-0.1	0	-0.2	0.2	-0.1	0	0.2
T	0.1	0	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	-0.3	0.1	0	0	0.7
G	-0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
P	0	0	-0.2	-0.2	0.2	0	0	0	0	0	0	0	0	0	0	-0.2	0.6	0.1	0	0
C	-0.3	0	0.4	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0107	1.2	-0.3	1.1	-0.1	1.5	-0.3	-0.6	-0.4	-0.6	0.1	0.1	-0.5	-0.5	-0.1	0.1	0.5	0.2	-0.6	0.1	-0.3
0268	1	-0.4	0.7	1.3	1	-0.4	-0.4	-0.4	-0.4	-0.4	-0.4	-0.4	-0.4	0	-0.4	0	0.5	-0.1	-0.4	0.3

Select residue pair below:

i_j	Score	Prob
0116_0268	3.269	1.00
0086_0268	1.622	0.90
0268_0281	1.113	0.54
0119_0268	1.051	0.48
0114_0268	0.999	0.43
0107_0268	0.827	0.27

Local Interactions:

i_j

Score

Prob

See all coupling residues
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