OPENSEQ.org -1517967808- GREMLIN Submission

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Coupling matrix for [R:0102] and [T:0202]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	1.1	-0.1	-0.2	-0.3	-0.4	0.1	0.4	1.2	-0.1	-0.1	-0.1
F	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
I	-0.2	0	0	0	0	0	0	0	0	-0.1	0	0	0	0.4	0	-0.1	-0.1	0	0	0
L	0.2	0	0	0	0	0	0	0	0	-0.1	0	0	0	-0.1	0	-0.1	0.2	0	0	0
V	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
M	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
W	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
Y	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
D	0	0	0	0	0	0	0	0	0	-0.2	-0.1	0.3	-0.1	-0.2	-0.1	0.5	0.6	0.2	0	0
E	0.6	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0	0.1	-0.1	-0.2	-0.2	0.8	-0.1	0.1	0.4	-0.1	-0.1	-0.1
K	-0.1	0	0	0	0	0	0	0	0	0.2	-0.1	-0.1	-0.1	0.7	-0.1	0.6	-0.4	-0.1	0	0
R	0.3	0	0	0	0	0	0	0	-0.1	-0.6	0.3	0.6	-0.2	0.3	0.1	0.2	-0.5	-0.1	0	0
H	0.6	0	0	0	0	0	0	0	0	0.2	0	0	0	-0.2	0.1	-0.2	-0.3	0	0	0
N	0.4	0	0	0	0	0	0	0	-0.1	-0.3	-0.1	-0.1	-0.1	0.2	0.3	-0.4	0.1	0.4	0	0
Q	-0.1	0	0	0	0	0	0	0	0	-0.2	0	-0.1	0.5	-0.3	-0.1	0	0.4	0.1	0	0
S	-0.3	0	0	0	0	0	0	0	0	0.4	0	-0.1	0.4	0.1	-0.1	0.1	0.4	-0.1	0	0
T	-0.1	0	0	0	0	0	0	0	0	-0.2	0	-0.1	0.4	0	0.3	0.4	-0.3	-0.1	0	0
G	0.2	0	0	0	0	0	0	0	0	-0.1	0	0	0	-0.1	0	-0.1	-0.1	0	0	0
P	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
C	-0.2	0	0	0	0	0	0	0	0.2	0.4	0	0	0	-0.1	0	-0.1	-0.2	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0102	0.6	-0.5	-0.4	-0.2	-0.5	-0.5	-0.5	-0.5	0.8	1.1	0.5	0.2	0.1	0.4	0	0.6	0.2	-0.2	-0.5	-0.3
0202	1.2	-0.6	-0.6	-0.6	-0.6	-0.6	-0.6	-0.6	-0.4	0.8	-0.4	0	0.1	1.4	0.2	1.7	1.4	0.1	-0.6	-0.6

Select residue pair below:

i_j	Score	Prob
0198_0202	2.583	1.00
0102_0202	0.909	0.34
0133_0202	0.841	0.28
0199_0202	0.832	0.27

Local Interactions:

i_j

Score

Prob

See all coupling residues
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