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Coupling matrix for [L:0065] and [L:0265]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F -0.7 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 1.4 0 0
I 1.7 -0.1 -0.1 -0.2 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.7 0.6 -0.6 -0.1 -0.1
L 1 -0.1 -0.1 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.2 -0.2 -0.1 -0.1
V 1.1 0 0 -0.1 0.5 0 0 0 0 0 0 0 0 0 0 -0.1 0.3 -0.4 0 0
M 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 1 0 0
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0065 0 0.3 0.8 0.8 1 0.2 -0.2 0.3 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
0265 3.2 -0.4 -0.4 0.1 0 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 0.7 0.6 1.1 -0.4 -0.4
Select residue pair below:
i_j Score Prob
0065_0265 0.804 0.25
0119_0265 0.685 0.17
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
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