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Coupling matrix for [V:0052] and [D:0054]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0 0 0 0 0 0 0 0.7 -0.5 -0.1 0.4 0.2 -0.2 -0.2 0.1 0.2 0 0 0
F -0.4 0 0 -0.1 -0.1 -0.1 0 -0.1 0.1 0.7 -0.1 -0.2 -0.1 0 0.5 0 0.3 -0.1 0 -0.1
I -0.2 0 0 0 0 0 0 0.2 0.1 0.1 0.2 -0.1 -0.1 0.1 0.2 -0.2 -0.1 0 0 0
L -0.2 0 0 0 0 0 0 0 0.2 0.7 -0.1 0.4 -0.1 -0.3 0 0 -0.1 0.1 0 0
V -0.6 -0.1 -0.1 -0.1 -0.2 0 -0.1 -0.2 0.3 0.3 0.2 0.1 0.8 0 0.1 0.6 -0.1 0 -0.1 -0.1
M -0.1 0 0 0 0 0 0 0 0.3 -0.2 0.4 0 0 -0.1 -0.1 -0.1 0 0 0 0
W -0.1 0 0 0 0 0 0 0 -0.1 0.3 -0.1 0 0 -0.1 -0.1 -0.1 0 0 0 0
Y 0.3 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 0.9 0.1 0 -0.3 -0.3 -0.1 0.2 0.2 0.2 -0.1 -0.1 0.1
D -0.1 0 0 0 0 0 0 0 -0.3 -0.1 -0.1 0 0 0.6 -0.1 -0.1 0 0 0 0
E 1.1 0 0 0 0.1 0 0 0 -0.5 -0.6 0.5 -0.1 -0.1 0.7 -0.3 -0.2 -0.1 0 0 0
K 0.3 0 0 0 0 0 0 0 0 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 0 0 0
R 0.2 0 0 0 0 0 0 0 0.3 -0.2 -0.2 -0.1 -0.1 -0.1 0.7 -0.1 -0.1 0 0 0
H 0.1 0 0 0.1 0.1 0 0 0 0 0.2 -0.2 0.3 -0.2 0.1 -0.2 0.1 -0.1 0 0 0
N 0 0 0 0 0 0 0 0 -0.2 0.2 0 0 0 -0.1 0 0 0 0 0 0
Q -0.1 0 0 0 0 0 0 0 -0.2 -0.1 0 0 0.4 -0.1 0 -0.1 0 0 0 0
S 0 0 0 0 0 0 0 0 -0.2 0.2 0 0 0 0 0 0 0 0 0 0
T 0.3 0 0 0 0 0 0 0 -0.1 -0.4 -0.1 -0.1 0.2 0.2 -0.1 0.2 0 0 0 0
G 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0
C -0.1 0 0 0 0 0 0 0 0 0.5 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0052 0.3 0.7 0.1 0.4 1 0 -0.4 0.9 -0.4 0.3 0 0.4 0.2 -0.5 -0.3 -0.4 0 -0.7 -0.7 -0.2
0054 0.5 -0.7 -0.7 -0.6 -0.5 -0.5 -0.7 -0.6 1.7 1.8 0.3 0.1 0.5 0.6 0.5 0.8 -0.1 -0.5 -0.7 -0.6
Select residue pair below:
i_j Score Prob
0054_0057 1.036 0.46
0041_0054 0.855 0.29
0054_0198 0.743 0.21
Local Interactions:
i_j Score Prob
0054_0055 0.987 0.41
0052_0054 0.764 0.22
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
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