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Coupling matrix for [V:0038] and [A:0040]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.1 -0.3 -0.3 -0.3 -0.1 -0.1 -0.1 0.2 1 -0.1 -0.2 -0.1 -0.2 0.3 -0.2 0 0.2 -0.1 -0.1
F -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
I -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
L -0.2 0 0 -0.1 0 0 0 0 -0.1 0.1 -0.1 0 0 -0.1 -0.1 -0.1 0.5 -0.1 0 0
V 0.4 0 -0.1 -0.2 -0.1 0.5 0 0 -0.2 0.6 -0.2 -0.1 0 -0.1 -0.2 -0.3 0.3 0.4 0 0
M -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
W -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 0 -0.1 0 0 0 0 -0.1 -0.1 -0.1 0 0 0 0 0.4 0 0 0 0
D 1.5 -0.1 -0.4 0.7 -0.1 -0.3 -0.1 -0.1 -0.1 -1.1 1.1 0.1 -0.1 -0.2 0.8 0.8 -0.4 0 -0.1 -0.1
E -0.4 -0.1 0.2 0.7 0.8 -0.1 -0.1 -0.1 -0.4 -0.8 0.2 0.3 -0.1 -0.2 -0.2 0.3 -0.2 0.4 -0.1 -0.1
K 0.2 0 0.1 0 -0.1 -0.1 0 0 -0.1 0 -0.2 -0.1 0 -0.1 0.3 -0.2 0.4 -0.1 0 0
R -0.1 0 0 -0.1 0 0 0 0 -0.1 0.3 -0.1 0 0 0 0 -0.1 0 0 0 0
H -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
N 0.1 -0.1 0.1 -0.2 0.3 -0.1 -0.1 -0.1 0.6 0.6 0.4 -0.1 -0.1 0.5 -0.4 -0.2 -0.2 -0.3 -0.1 -0.1
Q -0.2 0 -0.1 0.1 -0.1 0 0 0 0.2 0.2 0.4 0 0 -0.1 -0.1 0.1 -0.1 -0.1 0 0
S -0.3 0 0.8 -0.1 -0.2 -0.1 0 0 -0.2 0.3 -0.3 -0.1 0 -0.1 -0.2 0.5 -0.1 -0.1 0 0
T -0.2 0 -0.1 0.4 0 0.5 0 0 0.1 -0.3 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0
G 0.4 0 -0.1 0.1 -0.1 -0.1 0 0 -0.1 0.4 0.2 -0.1 0 -0.1 -0.2 -0.3 0 -0.1 0 0
P -0.4 -0.1 -0.2 -0.4 -0.2 -0.1 -0.1 -0.1 0.7 0.5 -0.5 0.3 -0.1 0.9 0.6 0.1 0 -0.2 -0.1 -0.1
C -0.1 0 0 -0.1 0 0 0 0 -0.1 -0.2 -0.1 0 0 0 -0.1 -0.1 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0038 0.8 -0.8 -0.7 -0.1 0.6 -0.8 -0.8 -0.5 1.1 1 0.3 -0.6 -0.8 0.4 -0.1 0.3 -0.2 0.6 1.4 -0.5
0040 1 -0.9 -0.2 0.4 -0.1 -0.5 -0.9 -0.9 0.5 1.8 0.8 -0.5 -0.9 0.1 0.5 0.9 0 -0.1 -0.9 -0.9
Select residue pair below:
i_j Score Prob
0038_0296 0.694 0.18
Local Interactions:
i_j Score Prob
0038_0040 2.578 1.00
0038_0039 0.762 0.22
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
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