May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
3wbf Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [V:0038] and [L:0039]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 -0.1 -0.3 -0.2 -0.3 0 -0.1 -0.1 -0.1 -0.3 -0.2 -0.1 -0.2 -0.2 0.1 0.2 -0.1 0.7 0.5 -0.1
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 -0.1 0 -0.1 -0.2 0
L -0.1 0 -0.1 0 -0.1 0 0 0 0 0.5 -0.1 0 0 -0.1 0 -0.2 0.4 -0.1 -0.3 0
V 0.2 0 0.3 0.4 -0.1 0 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.9 -0.3 -0.9 -0.1
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0
Y -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.2 0.5
D -0.2 -0.1 0.6 -0.3 0.6 -0.1 -0.1 -0.1 -0.2 -0.2 0.2 -0.1 -0.1 -0.2 -0.2 0.8 -0.2 -0.5 1.9 -0.1
E -0.2 -0.1 0.2 0.3 -0.2 -0.1 -0.1 -0.1 -0.2 -0.2 -0.2 -0.1 -0.1 -0.1 -0.1 0.2 0.4 0.9 0.6 -0.1
K -0.1 0 0.4 -0.1 0.4 0 0 0 -0.1 -0.1 -0.1 0 0.5 0.5 -0.1 -0.3 -0.1 0 -0.2 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0.2 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0
N -0.2 0 -0.1 -0.1 -0.1 0 0 0 0.6 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.3 0.3 -0.2 1.6 -0.1
Q -0.1 0 -0.1 0 -0.1 0 0 0 0 -0.1 0.5 0 0 0 0 -0.1 -0.1 -0.1 0.3 0
S -0.2 0 -0.1 0.4 -0.1 0 0 0 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0 0.7 -0.2 0.5 0.1 -0.1
T -0.1 0 -0.1 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0.1 0.3 -0.1 0.4 -0.2 0
G 1.2 0 -0.2 -0.1 -0.1 0 0 0 0.3 0.7 -0.1 -0.1 -0.1 -0.1 -0.1 0.5 -0.2 0.1 -0.7 -0.1
P 0 -0.1 -0.3 -0.2 0.2 -0.1 -0.1 -0.1 -0.1 0.4 0.8 -0.1 0.2 0.6 0.5 -0.4 -0.4 -0.5 -0.4 -0.1
C 0 0 0 0 0 0 0 0 0 0 0 0.6 0 0 0 -0.1 0 -0.1 -0.3 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0038 0.8 -0.8 -0.7 -0.1 0.6 -0.8 -0.8 -0.5 1.1 1 0.3 -0.6 -0.8 0.4 -0.1 0.3 -0.2 0.6 1.4 -0.5
0039 0.5 -0.8 0.1 -0.2 -0.1 -0.8 -0.8 -0.8 -0.3 0 0.1 -0.6 -0.4 -0.2 -0.2 1.2 0.4 0.9 1.6 -0.5
Select residue pair below:
i_j Score Prob
0039_0042 0.729 0.20
Local Interactions:
i_j Score Prob
0038_0039 0.762 0.22
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
Page generated in 0.0098 seconds.