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Coupling matrix for [V:0022] and [L:0030]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 -0.1 0 0.2 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.4 0.3
F 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.2 -0.2 -0.5 1.2 0.7 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 0.2
L 0.2 0.2 1.1 0.3 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.2 -0.1 0.6
V 0.3 0 -0.1 1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.2 -0.4
M 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0022 0.7 -0.2 0.3 0.8 0.5 -0.2 -0.2 -0.2 -0.2 0 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2 -0.2 -0.1
0030 0.3 -0.2 1.1 3.1 1.2 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.2 -0.2 -0.2 0.9
Select residue pair below:
i_j Score Prob
0030_0049 0.918 0.35
0022_0030 0.861 0.30
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
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