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Coupling matrix for [V:0006] and [M:0028]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 1.7 0.9 -0.7 -0.2 -0.1 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 -0.3
F 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.1 -0.7 -0.3 1.2 0.1 1.2 -0.1 0.2 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 0.4
L 0 -0.4 -0.2 0.5 0.7 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.3
V -0.1 0.2 0.4 0 0.2 1.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1
M 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.2 0 0.5 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0.2 -0.1 -0.1 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
G 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0006 1.2 -0.4 1.7 0.7 1.8 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.2 -0.4 -0.4 -0.3 0.1 -0.4 -0.4 -0.4
0028 -0.4 0.5 0.8 1.3 0.7 1.7 -0.4 -0.1 -0.4 -0.2 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 0.1 -0.4 -0.4 0.2
Select residue pair below:
i_j Score Prob
0006_0028 1.798 0.95
0022_0028 1.069 0.50
0028_0273 0.713 0.19
0002_0028 0.671 0.16
Local Interactions:
i_j Score Prob
0026_0028 0.709 0.19
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
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