May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
3wbf Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [R:0005] and [V:0031]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0 0 -0.1 0.2 0.3 0 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0
F -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0.5 0 0.5 0.7 -0.1 -0.1 -0.2 -0.1 0.4 -0.4 -0.2 -0.1 -0.1 -0.1 0.2 0.4 -0.1 -0.1 -0.1
R 1.1 -0.4 0.2 -0.4 1.1 -0.1 -0.1 -0.2 0.1 -0.2 0.7 -0.2 -0.1 -0.1 -0.1 0.1 0 -0.1 -0.1 -0.1
H -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0.4 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0.3 0.4 -0.1 0 0 0 -0.1 -0.1 0 0 0
Q 0.2 0 0 0 0.1 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0 0 -0.2 0 0 0.5 0 -0.1 0 0 0 0 0 0 0 0 0 0
T 0.1 0 0 0.4 -0.3 0 0 0 0 0.3 -0.1 0 0 0 0 -0.1 -0.1 0 0 0
G -0.1 0 0 0 -0.2 0 0 0 0 0 0 0.5 0 0 0 0 0 0 0 0
P -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0005 0 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 1.7 1.3 -0.3 0.5 0 -0.1 0.2 -0.1 -0.3 -0.3
0031 0.8 -0.1 -0.1 0.3 1 -0.1 -0.4 -0.1 -0.2 0.6 0.5 -0.2 -0.4 -0.4 -0.4 0.2 0.8 -0.4 -0.4 -0.4
Select residue pair below:
i_j Score Prob
0005_0115 1.008 0.43
0005_0031 0.913 0.34
0005_0198 0.886 0.32
0005_0194 0.780 0.23
0005_0019 0.766 0.22
0005_0059 0.718 0.19
0005_0195 0.698 0.18
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
Page generated in 0.0105 seconds.