May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0144] and [P:0148]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0
F -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0 0.4 0.5 0.2 0 0 0.1 0 0 -0.1 -0.1 0 -0.1
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0.1 0 0 0 0 0 0 0 0 0.2 0 0 0 0 0 0 0 0 -0.1 0
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0 0 0 -0.1 0
Y 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0.3 0 0 0 0 -0.1 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
E 0.1 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0.3 -0.1 0 -0.1 0 0 0.9 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 0 0 0 0.3 0 0 0 0 0 0 0 -0.1 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 0 0 0 0 0 0 0 0 0.2 0 0 0 0 0 0 0 -0.1 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0144 0.1 0.7 -0.2 0.1 -0.2 -0.2 -0.1 0.1 0.2 0.8 -0.2 -0.2 0.1 -0.2 -0.2 -0.1 -0.2 -0.2 -0.2 -0.2
0148 0.1 -0.4 -0.4 -0.4 -0.4 -0.1 -0.4 -0.2 0.3 0.6 0.4 -0.2 0.1 0.6 -0.2 0.1 -0.4 -0.1 0.9 -0.4
Select residue pair below:
i_j Score Prob
0145_0148 1.360 0.82
0143_0148 1.214 0.71
0144_0148 1.121 0.62
0142_0148 1.031 0.52
Local Interactions:
i_j Score Prob
0148_0149 0.975 0.46
0146_0148 0.811 0.30
0147_0148 0.766 0.26
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.02 seconds.