May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [R:0112] and [D:0113]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L -0.1 0 -0.1 0.1 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 1.1 0 -0.1 -0.1 -0.1 -0.1 0 0 0
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W -0.1 0 0 -0.1 0 -0.1 0 0.5 -0.1 0 -0.1 -0.2 0 0.4 -0.1 -0.1 -0.1 0 0 0
Y -0.1 0 0 0.4 0 -0.1 0 0 -0.1 0 0.4 -0.2 0 0 0 -0.1 -0.1 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 1.1 -0.1 0.5 -0.2 -0.1 0 -0.1 -0.3 0.2 0.2 0.4 -0.7 -0.2 0 -0.2 -0.4 0.4 0.8 -0.1 -0.2
R -0.5 -0.2 0 0.4 -0.2 -0.4 -0.2 -0.3 0.5 -0.2 0.2 0 0.2 0.5 0.6 0.7 0.5 -0.4 -0.2 0.1
H -0.1 0 -0.1 -0.1 0 -0.1 0 -0.1 -0.1 0 -0.1 0.9 0 -0.1 0.2 -0.1 -0.1 0 0 0
N 0.4 0 0 -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0
Q 0.1 -0.1 -0.2 0.3 -0.1 0.9 -0.1 0.6 0.6 -0.1 -0.3 -0.1 0.2 -0.2 -0.3 -0.1 -0.3 -0.1 -0.1 -0.1
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 -0.1 -0.1 -0.3 -0.1 0.2 -0.1 -0.1 -0.3 0.1 0.1 0.7 -0.1 -0.2 0.2 0.6 0 -0.1 -0.1 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0112 -0.4 -0.4 -0.4 0.1 -0.4 -0.4 0 0.1 -0.4 -0.4 1.6 1.3 0.1 -0.1 1 -0.4 -0.4 -0.4 -0.4 0.6
0113 0.7 -0.9 -0.2 0.5 -0.8 0.3 -0.9 -0.1 0.7 -0.4 0.6 1.6 -0.3 0.2 0.2 0.5 0.3 -0.3 -0.9 -0.5
Select residue pair below:
i_j Score Prob
Local Interactions:
i_j Score Prob
0112_0113 1.197 0.69
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.0085 seconds.