May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [Y:0100] and [V:0119]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F -0.6 -0.1 -0.1 -0.1 1.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.2
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L -0.2 0 -0.1 0.4 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.6
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 1.3 -0.1 0.9 -0.3 0.9 -0.1 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.3 -0.1 -0.5
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0.5 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0.3 0 -0.1 0 -0.2 0 0 0 0.5 0 0 0 0 0 0 0 0 0 0 -0.1
N -0.1 0 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0.3 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.2 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.5 0 -0.1
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.2 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0100 -0.2 1.1 -0.2 0.6 -0.2 -0.2 -0.2 0.8 -0.2 -0.2 -0.2 0.2 0.3 0.1 0 -0.2 0 -0.2 -0.2 -0.1
0119 1.7 -0.4 0.8 -0.1 2 -0.4 -0.4 -0.4 -0.1 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 -0.4 0 -0.1 -0.4 1.3
Select residue pair below:
i_j Score Prob
0047_0119 1.326 0.80
0100_0119 0.802 0.29
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.1514 seconds.