May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RatApobecStart Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [F:0093] and [A:0097]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.7 0 -0.1 0 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
L -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0 0.8 0 0
V 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.1 -0.1 0 0
M -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
W -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
Y -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 0 0 0
D -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0 0 0
E 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
K -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.5 0 -0.1 0 0.3
R 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 -0.1 0
H -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0 0 0
N 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 -0.1 0 0
Q 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 -0.1 0 0
S 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 -0.1 0.3 -0.1
T 0.8 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 -0.4 0 0.1 0 0
G -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
P -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0
C 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0093 0.1 -0.4 -0.4 0.1 0.3 -0.6 -0.6 -0.3 0 0 0.5 0.6 0.1 0.4 0.2 0.8 0.8 -0.6 -0.6 0
0097 0.5 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1 -0.1 0.2 0.1 0.1
Select residue pair below:
i_j Score Prob
0017_0093 1.270 0.76
0063_0093 1.193 0.69
0085_0093 1.158 0.66
0093_0097 0.965 0.45
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...

Page generated in 0.0125 seconds.