May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
RatApobecStart Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0092] and [R:0112]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 0 0 0 0 0 0 0 0 0.5 -0.1 0 0 -0.1 0 0 0 0 0
I 0 0 0 0 0 0 -0.1 -0.1 0 0 0.8 -0.2 -0.1 0 0.5 0 0 0 0 -0.1
L -0.2 -0.2 -0.2 0.2 -0.2 -0.2 0.1 -0.1 -0.2 -0.2 0.1 1.3 0.2 -0.4 0.5 -0.2 -0.2 -0.2 -0.2 0.6
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 0 -0.1 0 0 0 0.4 0 0 0.1 -0.2 0 0.4 -0.2 0 0 0 0 -0.1
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 0 -0.1 0.3 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0092 -0.2 0.3 0.9 0.8 -0.2 0.8 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 -0.2
0112 -0.4 -0.4 -0.4 0.1 -0.4 -0.4 0 0.1 -0.4 -0.4 1.6 1.3 0.1 -0.1 1 -0.4 -0.4 -0.4 -0.4 0.6
Select residue pair below:
i_j Score Prob
0112_0123 0.984 0.47
0092_0112 0.927 0.41
0112_0116 0.881 0.37
Local Interactions:
i_j Score Prob
0112_0113 1.197 0.69
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: H E F E V ...
Page generated in 0.0126 seconds.